Table 3 Genetic parameters estimates using ABLUP-GC2 model
From: Modelling of population structure through contemporary groups in genetic evaluation
Gowan Hill | Add.gen | Rep | Rep(Set) | Residual | h2 | r | AIC |
DBH1 | 211 (34.3) | 45.5 (13.6) | 14.9 (4.76) | 671 (31.0) | 0.24 (0.04) | 0.53 | 47691 |
STR1 | 0.12 (0.02) | 0.02 (0.01) | 0.01 (0.00) | 0.29 (0.02) | 0.29 (0.04) | 0.56 | 737 |
MAL1 | 0.05 (0.01) | 0.11 (0.03) | 0.01 (0.00) | 0.34 (0.01) | 0.12 (0.03) | 0.30 | 572 |
VEL1 | 0.06 (0.01) | 0.01 (0.00) | 0.00 (0.00) | 0.05 (0.01) | 0.51 (0.07) | 0.56 | -4242 |
DBH2 | 829 (133) | 87.7 (28.0) | 15.7 (13.8) | 2305 (118) | 0.27 (0.04) | 0.54 | 52767 |
STR2 | 0.19 (0.02) | 0.01 (0.00) | 0.01 (0.00) | 0.21 (0.02) | 0.48 (0.06) | 0.66 | 218 |
BR2 | 0.04 (0.01) | 0.01 (0.00) | 0.01 (0.00) | 0.31 (0.01) | 0.10 (0.03) | 0.37 | -135 |
MAL2 | 0.09 (0.02) | 0.04 (0.01) | 0.00 (0.00) | 0.39 (0.02) | 0.18 (0.04) | 0.44 | 1391 |
AC2 | 0.57 (0.13) | 0.10 (0.04) | 0.03 (0.03) | 1 (NA) | 0.19 (0.03) | 0.49 | 17129 |
Kaingaroa | Add.gen | Rep | Rep(Set) | Residual | h2 | r | AIC |
DBH1 | 419 (63.0) | 45.9 (14.6) | 18.7 (6.69) | 790 (53.3) | 0.35 (0.05) | 0.58 | 44644 |
STR1 | 0.06 (0.01) | 0.06 (0.02) | 0.01 (0.00) | 0.35 (0.01) | 0.14 (0.03) | 0.36 | 788 |
MAL1 | 0.04 (0.04) | 0.15 (0.04) | 0.01 (0.01) | 1.03 (0.05) | 0.04 (0.04) | NA | 3207 |
VEL1 | 0.10 (0.03) | 0.00 (0.00) | 0.01 (0.01) | 0.02 (0.02) | 0.84 (0.21) | 0.25 | -586 |
DBH2 | 1050 (207) | 78.4 (29.8) | 30.3 (25.4) | 2416 (184) | 0.30 (0.06) | 0.46 | 30879 |
STR2 | 0.10 (0.02) | 0.08 (0.02) | 0.01 (0.00) | 0.34 (0.02) | 0.22 (0.05) | 0.37 | 743 |
BR2 | 0.04 (0.01) | 0.00 (0.00) | 0.01 (0.00) | 0.21 (0.01) | 0.14 (0.04) | 0.33 | -1080 |
MAL2 | 0.07 (0.04) | 0.14 (0.04) | 0.00 (0.00) | 0.60 (0.05) | 0.09 (0.07) | 0.20 | 1173 |
AC2 | 0.20 (0.09) | 0.09 (0.04) | 0.06 (0.04) | 1 (NA) | 0.05 (0.02) | 0.19 | 8369 |
NR2 | 0.04 (0.01) | 0.19 (0.05) | 0.02 (0.00) | 0.23 (0.01) | 0.13 (0.04) | 0.17 | -678 |