Table 2 Genetic parameters estimates using ABLUP-R model
From: Modelling of population structure through contemporary groups in genetic evaluation
Gowan Hill | Prov/Add.gen | Rep | Rep(Set) | Residual | h2/ QST | r | AIC |
DBH1 | 140 (45.2) 212 (34.4) | 45.3 (13.6) | 14.9 (4.77) | 671 (31.0) | 0.21 (0.03) 0.25 (0.07) | 0.52 | 47864 |
STR1 | 0.02 (0.01) 0.12 (0.02) | 0.02 (0.01) | 0.01 (0.00) | 0.30 (0.02) | 0.27 (0.04) 0.07 (0.03) | 0.55 | 674 |
MAL1 | 0.01 (0.00) 0.05 (0.01) | 0.11 (0.03) | 0.01 (0.00) | 0.34 (0.01) | 0.11 (0.03) 0.08 (0.04) | 0.41 | 495 |
VEL1 | 0.01 (0.00) 0.06 (0.01) | 0.01 (0.00) | 0.00 (0.00) | 0.06 (0.01) | 0.47 (0.06) 0.07 (0.03) | 0.55 | -4326 |
DBH2 | 412 (139) 835 (133) | 88.3 (28.1) | 15.3 (13.7) | 2301 (118) | 0.24 (0.04) 0.20 (0.06) | 0.53 | 52972 |
STR2 | 0.01 (0.01) 0.18 (0.02) | 0.01 (0.00) | 0.01 (0.00) | 0.21 (0.02) | 0.45 (0.05) 0.03 (0.02) | 0.65 | 153 |
BR2 | 0.00 (0.00) 0.03 (0.01) | 0.01 (0.00) | 0.01 (0.00) | 0.31 (0.01) | 0.10 (0.03) 0.05 (0.03) | 0.38 | -233 |
MAL2 | 0.02 (0.01) 0.09 (0.02) | 0.04 (0.01) | 0.00 (0.00) | 0.39 (0.02) | 0.17 (0.03) 0.10 (0.04) | 0.44 | 1328 |
AC2 | 0.16 (0.07) 0.45 (0.10) | 0.09 (0.04) | 0.03 (0.03) | 1 (NA) | 0.14 (0.03) 0.15 (0.06) | 0.31 | 16908 |
Kaingaroa | Prov/Add.gen | Rep | Rep(Set) | Residual | h2/ QST | r | AIC |
DBH1 | 305 (90.1) 405 (61.4) | 45.6 (14.5) | 18.7 (6.69) | 801 (52.2) | 0.27 (0.04) 0.27 (0.04) | 0.56 | 44840 |
STR1 | 0.00 (0.00) 0.05 (0.01) | 0.06 (0.02) | 0.01 (0.00) | 0.35 (0.01) | 0.13 (0.03) 0.03 (0.02) | 0.41 | 694 |
MAL1 | 0.01 (0.01) 0.02 (0.04) | 0.15 (0.04) | 0.01 (0.01) | 1.04 (0.04) | 0.02 (0.03) 0.16 (0.24) | 0.15 | 3142 |
VEL1 | 0.00 (0.00) 0.09 (0.02) | 0.00 (0.00) | 0.01 (0.01) | 0.03 (0.02) | 0.77 (0.18) 0.00 (0.00) | 0.15 | -637 |
DBH2 | 474 (156) 1027 (203) | 77.4 (29.5) | 30.5 (25.4) | 2433 (181) | 0.26 (0.05) 0.19 (0.06) | 0.44 | 31092 |
STR2 | 0.01 (0.00) 0.09 (0.02) | 0.08 (0.02) | 0.01 (0.00) | 0.34 (0.02) | 0.20 (0.05) 0.04 (0.02) | 0.39 | 666 |
BR2 | 0.00 (0.00) 0.03 (0.01) | 0.00 (0.00) | 0.01 (0.00) | 0.22 (0.01) | 0.13 (0.04) 0.04 (0.03) | 0.34 | -1177 |
MAL2 | 0.01 (0.01) 0.05 (0.04) | 0.14 (0.04) | 0.00 (0.00) | 0.61 (0.04) | 0.08 (0.06) 0.11 (0.10) | 0.21 | 1116 |
AC2 | 0.08 (0.04) 0.16 (0.08) | 0.09 (0.04) | 0.06 (0.03) | 1 (NA) | 0.04 (0.02) 0.20 (0.12) | 0.21 | 8263 |
NR2 | 0.01 (0.01) 0.03 (0.01) | 0.19 (0.05) | 0.02 (0.00) | 0.23 (0.01) | 0.12 (0.04) 0.17 (0.07) | 0.32 | -751 |