Table 1 Genetic parameters estimates using ABLUP-F model. Variance components, heritability (their standard errors in parentheses), breeding values accuracy and Akaike’s Information Criterion (AIC) for traits measured at Gowan Hill and Kaingaroa sites ABLUP-F model
From: Modelling of population structure through contemporary groups in genetic evaluation
Gowan Hill | Add.gen | Rep | Rep(Set) | Residual | h2 | r | AIC |
DBH1 | 211 (34.3) | 45.5 (13.6) | 14.9 (4.76) | 671 (31.0) | 0.24 (0.04) | 0.52 | 47691 |
STR1 | 0.12 (0.02) | 0.02 (0.01) | 0.01 (0.00) | 0.24 (0.02) | 0.29 (0.04) | 0.54 | 737 |
MAL1 | 0.05 (0.01) | 0.11 (0.03) | 0.01 (0.00) | 0.34 (0.01) | 0.12 (0.03) | 0.40 | 572 |
VEL1 | 0.06 (0.01) | 0.01 (0.00) | 0.00 (0.00) | 0.05 (0.01) | 0.51 (0.07) | 0.54 | -4242 |
DBH2 | 829 (133) | 87.7 (28.0) | 15.7 (13.8) | 2305 (118) | 0.27 (0.04) | 0.53 | 52767 |
STR2 | 0.19 (0.02) | 0.01 (0.00) | 0.01 (0.00) | 0.21 (0.02) | 0.48 (0.06) | 0.64 | 218 |
BR2 | 0.04 (0.02) | 0.01 (0.00) | 0.01 (0.00) | 0.31 (0.01) | 0.10 (0.03) | 0.38 | -135 |
MAL2 | 0.09 (0.02) | 0.04 (0.01) | 0.00 (0.00) | 0.39 (0.02) | 0.18 (0.04) | 0.44 | 1391 |
AC2 | 0.49 (0.11) | 0.10 (0.04) | 0.03 (0.03) | 1 (NA) | 0.16 (0.03) | 0.31 | 17094 |
Kaingaroa | Add.gen | Rep | Rep(Set) | Residual | h2 | r | AIC |
DBH1 | 413 (62.5) | 45.9 (14.5) | 18.8 (6.69) | 794 (52.9) | 0.34 (0.05) | 0.55 | 44636 |
STR1 | 0.06 (0.01) | 0.06 (0.02) | 0.01 (0.00) | 0.35 (0.01) | 0.14 (0.03) | 0.40 | 792 |
MAL1 | 0.04 (0.04) | 0.15 (0.04) | 0.01 (0.01) | 1.03 (0.05) | 0.04 (0.04) | 0.17 | 3208 |
VEL1 | 0.10 (0.03) | 0.00 (0.00) | 0.01 (0.01) | 0.02 (0.02) | 0.84 (0.21) | 0.14 | -586 |
DBH2 | 1050 (207) | 78.0 (29.7) | 30.1 (25.4) | 2415 (183) | 0.30 (0.06) | 0.43 | 30872 |
STR2 | 0.10 (0.02) | 0.08 (0.02) | 0.01 (0.00) | 0.34 (0.02) | 0.23 (0.05) | 0.38 | 747 |
BR2 | 0.04 (0.01) | 0.00 (0.00) | 0.01 (0.00) | 0.21 (0.01) | 0.15 (0.04) | 0.33 | -1076 |
MAL2 | 0.07 (0.04) | 0.14 (0.04) | 0.00 (0.00) | 0.59 (0.05) | 0.10 (0.07) | 0.22 | 1176 |
AC2 | 0.20 (0.09) | 0.09 (0.04) | 0.06 (0.04) | 1 (NA) | 0.05 (0.02) | 0.21 | 8373 |
NR2 | 0.04 (0.01) | 0.19 (0.05) | 0.02 (0.00) | 0.23 (0.01) | 0.14 (0.04) | 0.32 | -674 |