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Table 4 Identification of the codons showing the signature of positive select based on six different models implemented RDP and CODEML. The codons predicted to be PBR were highlighted by red

From: Polymorphism of MHC class IIB in an acheilognathid species, Rhodeus sinensis shaped by historical selection and recombination

  5 7 8 9 12 17 22 25 27 28 29 30 33 34 35 36 37 38 41 44 50 52 53  
Rhsi-DAB1
 SLAC   +                       
 FEL + +            +   +         +  
 MEME + +    +   +   +   +     + + + +      +  
 FUBAR + +   +     +   +    +   +         +  
 M2a + +   +     + + +     + +         +  
 M8 + +   +     + + +     + +        + +  
Rhsi-DAB3
 SLAC                         
 FEL                         
 MEME     +   +   +                 
 FUBAR     +     +            +      
 M2a         +            +      
 M8         +            +     +  
  54 57 58 60 61 63 64 65 67 68 71 72 74 75 77 78 82 83 84 85 86 88 90 91
Rhsi-DAB1
 SLAC              +      +       
 FEL        +   +     + +     +       
 MEME   +      +   + +    + + +    + + +   + +  
 FUBAR   +   +    +   +   +   + + +    +       
 M2a    + +    +   +   +    + +   + +       
 M8    + +    +   +   + + +   +   + +   +   +   
Rhsi-DAB3
 SLAC                         
 FEL                         
 MEME                         
 FUBAR +   +    +     + +   +      +       
 M2a    + + + + + +   + +   +      +   +   +   
 M8    + + + + + +   + +   +      +   +   +   
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