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Table 2 Five putative recombinants detected using seven different testing algorithms (R: RDP, C: CHIMAERA, G: GENECONV, S: SISCAN, B: BOOTSCAN, T: 3SEQ, M: MAXCHI) implemented in RDP4. Significance was indicated by ‘+’. ‘Unknown’ means that a definite parent allele was not estimated, but alleles with the highest probability were indicated in parentheses

From: Polymorphism of MHC class IIB in an acheilognathid species, Rhodeus sinensis shaped by historical selection and recombination

Recombinant

Breakpoints

Parent alleles

Algorithm

Begin

End

R

G

B

M

C

S

T

DAB3*07:01

1

144

DAB1*09:01

DAB3*01:07

+

+

+

+

+

+

+

DAB1*04:01

232

276

DAB1*01:13

Unknown (DAB1*03:06)

+

+

+

+

+

+

+

DAB1*03:07

225

274

DAB1*03:06

Unknown (DAB1*05:04)

+

+

–

+

+

–

+

DAB1*03:17

165

213

DAB1*03:02

DAB1*03:13

+

–

–

–

–

–

–

DAB1*10:02

82

172

DAB1*09:01

DAB1*03:05

+

–

–

+

+

–

+