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Table 4 Differentially expressed genes in overgrazing group compared to light grazing group

From: Hepatic transcriptome profile of sheep (Ovis aries) in response to overgrazing: novel genes and pathways revealed

Ensemble ID

Gene symbol

Annotation

log2FC

Down-regulated genes

  

Down

 ENSOARG00000008430

SCN2B

Sodium channel subunit beta-2

−5.8

 ENSOARG00000009284

UGT2B31

UDP-glucuronosyltransferase 2B31

−3.7

 ENSOARG00000014413

IFI27L2

Interferon alpha-inducible protein 27-like protein 2

−3.6

 ENSOARG00000018317

COL4A5

Collagen alpha-5(IV) chain

−3.3

 ENSOARG00000013977

ROCK2

Rho-associated protein kinase 2

−3.1

 ENSOARG00000006050

ORM1

Alpha-1-acid glycoprotein

−3.1

 ENSOARG00000011261

GLYAT

Glycine N-acyltransferase

−2.5

 ENSOARG00000018851

CEP290

Centrosomal protein of 290 kDa

− 2.0

 ENSOARG00000005827

C1ORF85

Lysosomal protein NCU-G1

−2.0

 ENSOARG00000017176

TCTN3

Tectonic-3

−1.9

 ENSOARG00000011449

PRLR

Prolactin receptor

−1.9

 ENSOARG00000005587

EXT1

Exostosin-1

−1.8

 ENSOARG00000020058

THBS1

Thrombospondin-1

−1.8

 ENSOARG00000014902

GSTA1

Glutathione S-transferase A1, N-terminally processed

−1.7

 ENSOARG00000014731

DDX58

Probable ATP-dependent RNA helicase DDX58

−1.5

 ENSOARG00000005951

RHBG

Ammonium transporter Rh type B

−1.3

 ENSOARG00000017047

ALDH1L1

Cytosolic 10-formyltetrahydrofolate dehydrogenase

−1.3

 ENSOARG00000011814

LRRC40

Leucine-rich repeat-containing protein 40

−1.3

 ENSOARG00000005886

PFKFB1

Fructose-2,6-bisphosphatase

−1.3

Sheep_newGene_2200

  

−1.2

 ENSOARG00000010283

MX1

Interferon-induced GTP-binding protein Mx1, N-terminally processed

−1.2

 ENSOARG00000012673

RCAN1

Calcipressin-1

−1.1

 ENSOARG00000017875

COL8A1

Vastatin

−1.1

 ENSOARG00000010155

RNF144B

E3 ubiquitin-protein ligase RNF144B

−1.1

 ENSOARG00000019483

FOS

Proto-oncogene c-Fos

−1.0

Up-regulated genes

  

Up

 Sheep_newGene_75

  

Inf

 Sheep_newGene_7857

  

Inf

 ENSOARG00000011401

RXRG

Retinoic acid receptor RXR-gamma

11.0

 Sheep_newGene_4617

  

4.4

 Sheep_newGene_7585

SULT3A1

Amine sulfotransferase

4.1

 ENSOARG00000000581

LRRC31

Leucine-rich repeat-containing protein 31

3.7

 ENSOARG00000003294

CYP4A6

Cytochrome P450 4A6

3.6

 ENSOARG00000009458

AQP7

Aquaporin-7

3.2

 Sheep_newGene_1150

  

2.9

 ENSOARG00000013615

FSTL1

Follistatin-related protein 1

2.4

 ENSOARG00000010334

KLKB1

Plasma kallikrein light chain

2.1

 ENSOARG00000010449

DHDH

Dihydrodiol dehydrogenase 3

2.0

 ENSOARG00000005941

TNC

Tenascin

2.0

 Sheep_newGene_3

  

1.8

 ENSOARG00000009239

BCL3

B-cell lymphoma 3 protein

1.7

 ENSOARG00000004859

HOP

Homeodomain-only protein

1.7

 ENSOARG00000004234

SLC45A3

Solute carrier family 45 member 3

1.5

 ENSOARG00000000804

POC1B

POC1 centriolar protein homolog B

1.5

 ENSOARG00000011986

RPL10A

60S ribosomal protein L10a

1.4

 ENSOARG00000013534

MYOC

Myocilin, C-terminal fragment

1.4

 ENSOARG00000010264

PDLIM2

PDZ and LIM domain protein 2

1.3

 Sheep_newGene_8346

CFH

Complement factor H

1.3

 ENSOARG00000000813

TECPR1

Tectonin beta-propeller repeat-containing protein 1

1.2

 ENSOARG00000020020

TUBA4A

Tubulin alpha-4A chain

1.1

 ENSOARG00000017743

SLC51B

Organic solute transporter subunit beta

1.1

  1. FC Fold change, Inf, positive infinity, it indicates that the gene is only expressed in the overgrazing group