From: Identifying and exploiting gene-pathway interactions from RNA-seq data for binary phenotype
Database | Pathway | Size | Top genesa |
---|---|---|---|
GO | RNA processing | 285 | TUBB, H3F3B, SDCBP, NT5C2, FKBP5 |
GO | RNA splicing | 127 | TUBB, IL1R2, H3F3B, IFNGR1, PCSK7 |
GO | cytosolic ribosome | 80 | TUBB, CAMP, SAMM50, PSMD14, CHD8 |
GO | Cytoplasmic translation | 25 | TUBB, SDCBP, H3F3B, CMAHP, SLC44A2 |
KEGG | Platelet activation | 70 | STX7, PCNP, SDCBP, LEF1, TMEM140 |
KEGG | Fc gamma R-mediated phagocytosis | 49 | STX7, PCNP, CGRRF1, SHOC2, EFTUD2 |