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Table 1 Parameter settings used for the simulation data

From: Identifying and exploiting gene-pathway interactions from RNA-seq data for binary phenotype

Parameters

Label

Settings

sample size

N

100, 200

number of genes in potential pathway

v

10,20, 30

correlation between genes in pathway

c

0, 0.25, 0.5

proportion of interaction genes

p

0.8, 1.0

OR of core gene

s

0, 1.5, 1.8, 2.0

OR of interactions

 

exp(s)/2

OR of genes in potential pathway

 

1.2