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Table 3 Summary of quantitative trait loci for stripe rust resistance identified at the adult plant stage among 93 northern Chinese wheat landraces

From: Characterization of molecular diversity and genome-wide association study of stripe rust resistance at the adult plant stage in Northern Chinese wheat landraces

QTL Name

Trait

Env.a

Marker

Position (cM)b

−log10(P)

R2

Reported QTL/genesc

Intervald

Reference

QYr.sicau-1B

DS

2016C

1,254,926

74.85

3

0.15

Qyr.wpg-1B.2

IWA63-IWA2707

Naruoka et al. [44]

QYr.cau-1BS

Xgwm264-Xwmc230

Quan et al. [45]

QYr.sicau-2D

DS

2017 M

1,112,673

84.89

3.22

0.18

QYr.caas-2DL

Xcfd44-wPt-6752

Ren et al. [46]

QPst.jic-2D

Xgwm539-Xgwm349

Melichar et al. [47]

QYr.sicau-3A

IT

2016 M

1,131,042

34.17

3.26

0.18

 

wPt-6422-wPt-7890

Rosewarne et al. [48]

QYr.sicau-3B.1

IT

2016 M

7,491,774

3.62

0.2

QYr.sicau-3B.2

IT

2016 M

3,027,061

9.02

4.13

0.24

QYr.sicau-3B.3

DS

2017 M

1,201,570

52.89

3.2

0.18

QYr.sicau-4A.1

DS&IT

2016 M

990,726

47.09

3.28

0.15

New

  

2016 M

990,726

47.09

3.14

0.14

QYr.sicau-4A.2

IT

2016 M

3,026,448

119.65

4.33

0.25

QYrst.orr-4AL

wPt-7924-rPt-7987

Dolores et al. [49]

QYr.sicau-4A.3

IT

2016C

4,406,922

132.76

3.6

0.2

QYrst.orr-4AL

wPt-9901-wPt-0032

Dolores et al. [49]

IT

2016 M

4,406,922

132.76

5.75

0.34

QYrid.ui-4A

wPt-6603-wPt-2151

Chen et al. [50]

QYr.sgi-4A.1

wPt-4620-Xwmc219

Prins et al. [51]

QYr.sicau-5A

IT

2016C

Xwmc410–3

3.02

0.13

QYr.caas-5AL

Xwmc410-Xbarc261

Lan et al. [52]

QYr.sicau-5B.1

DS

2017C

Xbarc172–7

3.32

0.16

QYr.sicau-5B.2

DS

2017 M

6,026,919

3.09

0.17

QYr.sicau-5B.3

DS

2017 M

3,533,933

58.79

3.3

0.18

QYrdr.wgp-5BL.1

iwa2365-iwa2093

Hou et al. [53]

QYrdr.wgp-5BL.2

iwa3025-iwa5803

Hou et al. [53]

QYr.sun-5B

wPt-3661-wPt-1733

Bariana et al. [55]

QYrco.wpg-5B

iwa5488-wPt-6135

Case et al. [54]

QYr.sicau-5B.4

DS

2017 M

3,385,066

3.26

0.18

QYr.sicau-5B.5

DS

2017 M

1,270,827

131.85

3.19

0.18

QYrdr.wgp-5BL.1

iwa2365-iwa2093

Hou et al. [53]

QYrdr.wgp-5BL.2

iwa3025-iwa5803

Hou et al. [53]

QYr.sicau-5D

IT

BLUE_ALL

1,099,801

3.55

0.19

QYr.sicau-6A.1

IT

2016 M

1,204,251

36.52

3.16

0.18

New

  

QYr.sicau-6A.2

DS

2017 M

1,695,635

87.39

3.83

0.21

New

  

DS

2017 M

3,955,268

87.60

3.29

0.18

QYr.sicau-6A.3

DS

2017 M

Xgwm169–4

4.35

0.25

New

  

DS

2017 M

Xgwm169–9

3.15

0.17

QYr.sicau-6B

DS

2017 M

3,025,054

31.19

3.34

0.18

Yr78

Xwmc737-IWA7257

Dong et al. [56]

DS

2017 M

1,074,322

26.85

3.69

0.21

QYrst.wgp-6BS.2

Xgwm132-Xgdm113

Santra et al. [57]

QYr.sicau-6D

IT

2016C

Xcfd95–2

3.15

0.13

QYr.ufs-6D

Xgwm325-Xbarc175

Agenbag et al. [58]

YrH9020a

Xbarc202-Xbarc96

Liu et al. [59]

QYr.sicau-7B

IT

BLUE_ALL

5,010,940

3.41

0.15

QYr.sicau-7D.1

DS

2017 M

995,958

65.83

4.12

0.23

New

  

BLUE_ALL

995,958

65.83

3.16

0.17

QYr.sicau-7D.2

DS

2016 M

1,095,389

94.32

3.54

0.16

New

  

993,762

97.09

3.54

0.16

  

QYr.sicau-7D.3

IT

BLUE_ALL

4,004,033

3.13

0.17

  1. a Four environments in this study, where 2016M = 2016 Mianyang, 2016C = 2016 Chongzhou, 2017M = 2017 Mianyang, 2017C = 2017 Chongzhou; BLUE_ALL was obtained across environments considering genotypes as a fixed effect in the model
  2. b The markers were positioned on the DArT-seq consensus map version 4.0 provided by Diversity Arrays Technology (https://www.diversityarrays.com)
  3. c Yr genes or QTL reported in previous studies, “-” indicates the QTL detected in the present study that could not be localized on the integrated map, “New” indicates the QTL detected in the present study that have not been reported preciously
  4. d The interval of the reported QTL or genes on the integrated map of previously reported stripe rust resistance genes and QTL (Additional file 6)