Starch phosphorylation associated SNPs found by genome-wide association studies in the potato (Solanum tuberosum L.)

Table 1 Significant SNPs discovered with the four statistical models

No	Marker	Chromosome	Position	Correction	p-value	Minor allele frequency	Polymorphism	Allele associated with high phosphorylation level
1	PotVar0043426^a	1	69,895,805	Bonferroni	0,00000064	0,35	A/G	G
2	solcap_snp_c2_17529^a	1	69,902,011	Bonferroni	0,00000131	0,32	A/G	G
3	solcap_snp_c1_5759^a	1	69,917,893	Bonferroni	0,00000167	0,40	A/G	G
4	solcap_snp_c2_17530^a	1	69,918,804	Bonferroni	0,00000104	0,33	T/A	A
5	PotVar0043516^a	1	69,872,835	Bonferroni	0,00000303	0,38	A/G	G
6	solcap_snp_c1_2519^c	1	79,487,269	Bonferroni	0,00000332	0,21	T/C	C
7	PotVar0084444^d	4	58,263,204	FDR	0,0000887	0,04	T/C	C
8	PotVar0018043^b	5	33,966,509	FDR	0,0000165	0,24	A/G	G
9	solcap_snp_c2_50231^b	5	36,834,630	FDR	0,000027	0,33	T/C	T
10	solcap_snp_c2_38828^b	7	588,137	FDR	0,0000375	0,21	A/G	G
11	solcap_snp_c1_6252^d	8	20,465,382	FDR	0,0000661	0,05	A/G	A
12	PotVar0065847^b	10	134,951	FDR	0,0000245	0,13	A/G	G
13	PotVar0065745^b	10	197,180	FDR	0,0000339	0,13	A/G	G
14	solcap_snp_c1_2187^b	11	2,562,328	FDR	0,000036	0,46	A/G	G
15	solcap_snp_c2_55899^c	Unknown	Unknown	FDR	0,00000901	0,30	T/G	T
16	solcap_snp_c2_53177^d	Unknown	Unknown	FDR	0,0000373	0,05	T/C	T
17	solcap_snp_c2_7785^d	Unknown	Unknown	FDR	0,0000663	0,07	A/G	G