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Table 3 Non-tolerant amino acid changes in the genes located in the B6.129P1-7LZnt7-KO proximal region (47.4–64.4 Mb)a

From: Subcongenic analysis of a quantitative trait locus affecting body weight and glucose metabolism in zinc transporter 7 (znt7)-knockout mice

Gene Symbol

cSNP

SNP ID

Protein Effect

PolyPhen-2 scoreb

Transcript ID

Oca2

c.784C > T

rs32980941

p.Arg262Ter

n.a.

ENSMUSP00000032633.5

Atp10a

c.118G > T

rs240949563

p.Gly40Cys

0.998

ENSMUST00000168747.2

E030018B13Rik

c.247G > T

rs31348450

p.Gly83Ter

n.a.

ENSMUST00000177638.1

  1. anon-tolerant amino acid change was predicted by SIFT (Sorting Intolerant from Tolerant, http://sift.bii.a-star.edu.sg/www/SIFT_seq_submit2.html); bhttp://genetics.bwh.harvard.edu/pph2/index.shtml. Scores close to 0 are predicted to be benign and scores to 1 indicate intolerance to substitution; n.a. not applicable
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BMC Genomic Data

ISSN: 2730-6844

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