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Fig. 2 | BMC Genetics

Fig. 2

From: Polymorphisms of HOMER1 gene are associated with piglet splay leg syndrome and one significant SNP can affect its intronic promoter activity in vitro

Fig. 2

Identification of genetics varieties and the linkage disequilibrium of SNPs in porcine HOMER1 gene. a Schematic diagram of the variants found in HOMER1 gene. The blue boxes represent the exon. The dotted represent the omitted base. The number in bracket represents the position of the SNP. The number of ATG in exon 5 is assigned + 1. The two regions from -670 bp to -621 bp and -255 bp to -208 bp are the promoter region predicted by NNPP. b The haplotype block linkage disequilibrium value (D’) for 10 significant different SNPs. The values within boxes are the linkage disequilibrium value (D’). The darker shanding indicates higher linkage disequilibrium value

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ISSN: 2730-6844

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