From: A genome wide association study for the number of animals born dead in domestic pigs
Parity | SSC | Range (Mb) | Number | Position(bp) | Alleles | P value | Candidate Gene |
---|---|---|---|---|---|---|---|
2 | 1 | 32.30–32.34 | 2 | 32,322,537 | A/G | 1.10E-07 | AKAP7 |
2 | 1 | 185.49–185.53 | 3 | 185,506,783 | C/A | 1.04E-07 |  |
2 | 4 | 133.07–133.11 | 2 | 133,090,486 | A/G | 1.90E-07 |  |
3 | 2 | 159.12–159.35 | 13 | 159,334,109 | C/T | 9.58E-14 |  |
3 | 18 | 15.29–15.42 | 8 | 15,306,205 | A/G | 1.05E-11 | EXOC4 |
4 | 2 | 53.53–53.57 | 5 | 53,550,664 | A/T | 8.13E-08 |  |
4 | 5 | 36.73–36.77 | 5 | 36,749,866 | T/G | 8.50E-08 |  |
4 | 5 | 49.74–53.88 | 28 | 49,763,855 | A/G | 2.89E-08 | SOX5/ST8SIA1/KCNJ8/ABCC9/GYS2/SPX/GOLT1B/PLEKHA5 |
4 | 7 | 116.70–116.74 | 2 | 116,719,034 | G/T | 1.32E-10 | SYNE3 |
4 | 15 | 62.98–63.02 | 14 | 63,000,645 | A/T | 9.45E-10 |  |
5 | 2 | 14.95–14.99 | 7 | 14,966,625 | G/A | 1.06E-09 | AGBL2/MTCH2 |
5 | 2 | 52.21–52.25 | 2 | 52,227,328 | T/C | 2.76E-09 | LOC100525099 |
5 | 3 | 27.64–27.90 | 4 | 27,657,943 | T/A | 1.68E-08 |  |
5 | 4 | 62.24–62.28 | 2 | 62,259,407 | A/C | 6.18E-13 | STAU2 |
5 | 7 | 121.12–121.16 | 5 | 121,138,988 | C/G | 2.16E-08 | YY1 |
5 | 8 | 5.54–5.58 | 2 | 5,558,816 | A/G | 6.84E-08 |  |
5 | 10 | 21.60–21.64 | 3 | 21,623,235 | C/T | 3.25E-15 |  |
5 | 15 | 52.89–52.93 | 4 | 52,912,314 | T/C | 1.44E-09 |  |
5 | 17 | 50.86–50.90 | 2 | 50,880,718 | T/G | 2.49E-10 | STAU1 |