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Table 3 Annotation of genes containing SNPs associated with gene expression or metabolite level related to drought response

From: Exploring the genetic basis of gene transcript abundance and metabolite levels in loblolly pine (Pinus taeda L.) using association mapping and network construction

SNP#

Gene function

SNP#

Gene function

1

auninformative

41

phospholipase D beta 1-like

2

apentatricopeptide repeat-containing protein

42

DNA helicase INO80-like

3

aPQ-loop repeat family protein

43

kinesin-4-like

4

aprotein sensitivity to red light reduced 1

44

aNBS/LRR, partial

5

wall-associated receptor kinase-like 14

45

LRR receptor-like

6

probable mediator of RNA polymerase II

46

auninformative

7

myrosinase-binding protein-like protein

47

L-ascorbate oxidase homolog

8

PHD finger protein alfin-like 5 isoform

48

MLO protein homolog 1-like

9

GDSL esterase/lipase

49

prephenate dehydrogenase family protein

10

guanine nucleotide-binding protein-like

50

auninformative

11

auninformative

51

UDP-glucuronyltransferase-like protein

12

bidirectional sugar transporter

52

protein transparent testa 12-like

13

heat stress transcription factor

53

aCytochrome P450 CYP736B9

14

aF6 N18.1

54

aCytochrome P450 CYP736B9

15

aleukocyte immunoglobulin-like receptor familyA

55

anucleotide-diphospho-sugar transferases

16

pentatricopeptide repeat-containing

56

cytochrome P450 71A1-like

17

cellulose synthase A catalytic subunit 6

57

transcription factor HY5-like

18

probable acyl-activating enzyme 1

58

expansin-B3 isoform X2

19

cytochrome b245 beta chain homolog RbohAp108

59

atransmembrane protein (DUF616)

20

transcription factor bHLH120-like

60

peroxygenase 2

21

heat shock 22 K family protein

61

14–3-3-like protein-like

22

aphosphatidylethanolamine-binding protein

62

L-type lectin-domain containing receptor kinase

23

avillin 2, actin binding protein

63

L-type lectin-domain containing

24

DNA topoisomerase 2

64

aprobable nucleoredoxin 1

25

acopia-like polyprotein

65

asulfite oxidase

26

amembrance trafficking family

66

thioesterase/thiol ester dehydrase-isomerase

27

lactosylceramide 4-alpha-galactosyltransferase

67

uninformative

28

galactomannan galactosyltransferase

68

chaperone protein ClpB1-like

29

pleiotropic drug resistance protein

69

60S ribosomal protein L7a

30

actin

70

amyb domain protein 17

31

aCML42, calcium-binding protein

71

homeobox-leucine zipper protein

32

aSWEET1, bidirectional sugar transporter

72

probable pectinesterase 53-like,

33

uninformative

73

aSUS2, sucrose synthase 2

34

GDSL esterase/lipase At1g74460-like

74

acaleosin-related family protein

35

aglycosyltransferase,partial

75

transaldolase 2

36

oxidoreductase

76

calcium-dependent protein kinase 3-like

37

aarmadillo/beta-catenin repeat family protein

77

calcium-dependent protein kinase 3-like

38

asedoheptulose-bisphosphatase

78

transcription factor GAMYB

39

aendonuclease/exonuclease/phosphatase family

79

UPL2, similar to E3 ubiquitin protein ligase

40

not_annotated

80

auninformative

  1. aBased on NCBI blastx results