Table 4 Assessment of transcription changes of genes with given alterations in the coding sequences
From: Exome scale map of genetic alterations promoting metastasis in colorectal cancer
Sample ID | 10.PT1 | 10.PT2 | 10.PT3 | 10.PT4 | 10.PT5 | 10.PT6 | 10.MT | 5.MT | 7.PT1 | 7.PT2 | 7.PT3 | 7.PT4 | 7.MT | 12.PT | 12.MT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
stopgain | 0.6 | 0.9 | 0.6 | 1.9 | 0.3 | 1.4 | 0.2 | 0.3 | 0.1 | 0.1 | 1.1 | 0.4 | |||
non silent | 7.4 | 8.1 | 7.5 | 8.8 | 4.5 | 6.9 | 0.7 | 0.5 | 0.5 | 0.0 | 0.2 | 1.3 | 0.4 | Inf | 2.1 |
silent exonic | 1.7 | 1.2 | 3.8 | 4.4 | 1.1 | 3.0 | 0.1 | 0.3 | 1.1 | 0.3 | 0.4 | 0.6 | 1.5 | 8.2 | 1.2 |
indels all | 0.2 | 0.6 | 0.8 | 0.2 | 1.0 | 0.7 | 0.3 | 0.3 | 3.3 | 0.5 | 0.4 | 0.3 | 0.0 | 2.3 | 0.1 |