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Fig. 2 | BMC Genetics

Fig. 2

From: Genome-wide analysis of long non-coding RNAs in Catalpa bungei and their potential function in floral transition using high-throughput sequencing

Fig. 2

Venn plots showing mRNA and lncRNA predictions. a Predicted coding genes. b Predicted non-coding genes. CPC1, txCdspredict, CNCI2, and Pfam3 were used to predict the mRNAs and lncRNAs. The parameters of the three programmes used for prediction are as follows: CPC threshold, ≥ 0 = mRNA, < 0 = lncRNA; txCdspredict threshold, ≥ 500 = mRNA, < 500 = lncRNA; CNCI threshold, ≥ 0 = mRNA, < 0 = lncRNA. Pfam is a protein-coding sequence database. Transcripts were confirmed as lncRNAs or mRNAs through prediction by at least three of the four methods

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BMC Genomic Data

ISSN: 2730-6844

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