Putative candidate genes responsible for leaf rolling in rye (Secale cereale L.)

BMC Genomic Data

Table 5 QTLs for leaf rolling (RL) in rye mapping population RIL-M, coinciding with QTLs for other traits, mapped previously in this population

Chrom.	Coinciding QTLs	Marker nearest to the QTL peak	QTL peak [cM]	QTL interval [cM]	LOD	a	r²
1R	RL08–1	Xpr57L1900	98	96–101	2.7	0.33	8.61
1R	TGW09	Xpr57L1900	98	98–102	3.03	−1.94	9.42
1R	RL12	XrPt507993	181	180–182	2.8	0.24	8.57
1R	PHS08	XrPt507993	181	178–183	3.02	−6.05	8.37
2R	HE08	Xrpt507900	202	200–206	3.33	0.55	8.74
2R	RL08–1	Xrpt507900	204	202–208	3.1	−0.31	9.63
4R	GNPS08	XrPt508114	89	87–91	3.05	6.77	10.8
	PHS10		89	85–106	2.69	−8.64	9.2
	RL09–1		90	87–96	3.21	− 0.51	11.73
4R	GNPS08	XrPt401039	207	206–208	4.47	−3.94	12.54
	RL10–2		207	205–208	3.36	−0.36	10.77
	GNPS_DI		207	205–210	2.73	12.76	15.45
5R	SCT09	Xpr665L1050	81	73–84	2.8	−0.1	12.02
	RL09–1		81	81–84	5.38	−0.35	18.59
	RL10–1		83	80–84	2.94	−0.29	10.06
	RL-08-1		84	82–84	4.01	−0.31	9.85
7R	RL17	Xopo7	76	74–84	3.46	−0.32	9.17
	PHS07		77	69–87	2.74	13.76	18.49
	HE09		84	74–95	2.3	0.83	16.97
7R	SNPP_DI	XrPt507004	219	214–228	1.85	−8.38	9.9
	PH08		220	216–222	2.76	4.15	8.31
	RL12		221	210–221	4.24	−0.27	13.52
7R	AA09	XrPt401480	227	226–238	8.25	1.21	22.85
	RL10–1		227	227–228	3.68	−0.28	11.51
	PHS08N		228	227–238	5.17	9.89	16.64
	GW09		229	224–229	2.11	−0.09	6.62

a – additive effect of the maternal allele, r² – variance explained by a QTL
TGW thousand grain weight, PHS preharvest sprouting, HE heading earliness, GNPS grain number per spike, GNPS_DI grain number per spike drought index, SCT spike compactness, SNPP_DI spike number per plant drought index, PH plant hight, AA α-amylase activity, GW grain weight per spike

ISSN: 2730-6844