Genetic variation and structure of maize populations from Saoura and Gourara oasis in Algerian Sahara

BMC Genomic Data

Table 2 Genetic diversity summary of statistics for 18 SSR loci across the 47 Algerian maize landraces

Locus	Bin	Range size	A	Ae	H	I	PIC	Fst
umc1222	1.01	107-190	20	2.012	0.503	0.961	0.701	0.329
umc1403	1.03	113-139	7	1.715	0.417	0.730	0.558	0.305
umc1335	1.06	106-158	19	3.003	0.667	1.451	0.858	0.241
umc1165	2.01	112-157	10	1.483	0.326	0.591	0.665	0.622
umc1265	2.02	93-119	8	1.811	0.448	0.726	0.735	0.427
phi127	2.08	79-153	6	1.333	0.250	0.473	0.313	0.299
bnlg1520	2.09	162-198	14	1.499	0.333	0.608	0.448	0.351
phi036	3.04	57-99	15	2.160	0.537	1.070	0.701	0.27
umc1963	4.04	108-138	7	1.572	0.364	0.578	0.565	0.435
umc1329	4.06	75-109	7	1.960	0.490	0.857	0.595	0.25
umc1225	5.08	80-128	20	1.957	0.489	0.978	0.656	0.317
umc1424	6.06	92-156	12	2.624	0.619	1.258	0.78	0.239
bnlg1740	6.07	93-186	10	1.801	0.445	0.788	0.529	0.215
umc1545	7	43-95	8	1.923	0.480	0.803	0.747	0.381
umc1327	8.01	48-101	8	2.433	0.589	1.074	0.71	0.227
umc1984	8.03	77-109	10	1.742	0.426	0.801	0.47	0.164
phi027	9.03	44-93	10	1.953	0.488	0.860	0.722	0.392
phi059	10.02	139-215	6	1.541	0.351	0.550	0.438	0.404
Mean	–	–	10.944	1.918	0.457	0.842	0.622	0.326

A number of alleles, Ae effective number of alleles, I Shannon’s Information index [Lewontin (1972)], PIC polymorphic information content, H total gene diversity, F_ST the inbreeding coefficient within subpopulations relative to the total population (genetic differentiation)

ISSN: 2730-6844