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Table 2 Selected SNPs that pass the threshold of 10− 4 in the GEE model

From: Incorporating methylation genome information improves prediction accuracy for drug treatment responses

SNP

Chromosome

Gene

Position

p Value

MAF

rs10521308

16

FTO

80,459,640

9.47E-05

0.05

rs2206135

20

CTNNBL1

35,914,069

7.75E-05

0.42

rs710711

12

BEST3

124,093,552

9.98E-05

0.38

rs7096710

10

C10orf59

63,063,177

2.92E-05

0.02

rs4851313

2

CHST10

100,395,434

5.47E-05

0.44

  1. MAF minor allele frequency