Identification of genes regulating traits targeted for domestication of field cress (Lepidium campestre) as a biennial and perennial oilseed crop

Table 2 Sequence identity (%) between field cress and seven other Brassicaceae species within partial sequences of coding regions of 30 genes regulating desirable traits in crops

Gene	Trait/gene function	A.lyrata	A. thaliana	B.rapa	B.napus	B.oleracea	Camelina sativa	Capsella rubella	Mean
AGL11	SD	95	95	91	92	92	96	96	93.9
SOC1	FT	94	94	93	93	93	94	93	93.4
TAG1	OC	94	93	93	93	93	93	95	93.4
AGL6	FT	95	98	90	91	91	92	92	92.7
VRN1	VRN	94	94	90	90	90	92	94	92.0
NAC012	PSH	92	92	91	91	90	93	92	91.6
FER	DR	93	93	89	89	89	92	91	90.9
FUL	FT, PSH	92	92	89	89	89	90	90	90.1
FLC	FT, VRN	89	90	88	88	88	90	92	89.3
MAF2	VRN	93	95	87	84	85	91	89	89.1
MAF5	VRN	93	95	87	84	85	91	89	89.1
AP2	FT	89	89	89	89	89	90	88	89.0
ADPG1	PSH	89	91	88	86	87	91	90	88.9
SHP1	PSH	90	90	89	89	89	89	86	88.9
SHP2	PSH	91	89	86	87	87	89	92	88.7
FAD2	OQ	91	91	85	85	85	90	91	88.3
VRN2	VRN	92	90	83	84	84	89	88	87.1
GTR2	GTR	88	88	86	86	86	88	88	87.1
FAE1	OQ	89	88	85	85	85	89	88	87.0
RPL	FT, PSH	89	89	85	85	84	88	88	86.9
VIN3	VRN	87	86	85	85	84	85	85	85.3
WRI1	OC	88	88	82	82	83	86	87	85.1
KCS8	OQ	88	87	82	83	82	87	86	85.0
ADPG2	PSH	85	84	82	82	82	89	90	84.9
IND	PSH	86	85	84	86	76	85	84	83.7
ALC	PSH	82	83	81	81	81	82	84	82.0
AGL16	FT	82	84	81	81	82	82	81	81.9
FRI	VRN, FT	84	81	81	81	80	82	83	81.7
HAI2	SD	82	82	81	80	80	81	82	81.1
ATG5	PD	82	81	79	80	72	84	80	79.7
Mean		89.3	89.2	86.1	86.0	85.4	88.7	88.5	87.6

DR Disease resistance, FT Flowering time, OC Oil content, OQ Oil quality, PD Plant defense, PSH Pod shattering, SD Seed dormancy, GTR Glucosinolate Transport, VRN Vernalization. Note: The matching of the Lepidium sequences with the right Arabidopsis gene sequences is highly significant, with e-values ranging from 0.0 to 1e⁻¹¹

ISSN: 2730-6844