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Table 1 Summary of the 10 selected regions harboring interesting candidate genes

From: Genome-wide detection of selection signatures in Chinese indigenous Laiwu pigs revealed candidate genes regulating fat deposition in muscle

SSC

Position (Mb)

Methods

Candidate genes

Function

1

16.50–16.75

iHS, CLR

ESR1

Litter size

5

49.00–49.25

FST, CLR

PTHLH

Mammary gland and nipple development

6

45.00–45.25

FST, CLR

TGFB1

Fat deposition

6

45.50–45.75

FST, CLR

GSK3A

glycogen synthase

8

45.25–45.5

FST, CLR

CPE

Fat deposition

8

2.75–3.00

FST, iHS, CLR

JAKMIP1

Feed intake

8

55.25–55.50

FST, CLR

NPY1R, NPY5R

Stimulation of appetite

8

74.00–74.25

FST, CLR

CXCL2, CXCL8

Immune response

8

79.75–80.00

FST, CLR

TLR2

Immune response

16

50.25–50.50

FST, iHS

PIK3R1

Energy balance