Sl.no. | miRNA_Acc | SSR motif | ESE* | ESS* | ISE* | ISS* | ESE | ESS | ISE | ISS |
---|---|---|---|---|---|---|---|---|---|---|
1 | ath-miR156a | ag | Â | Â | no ISE | Â | Â | Â | ag-ISE | Â |
2 | ath-miR156b | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
3 | ath-miR156d | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
4 | ath-miR156e | ag | Â | Â | no-ISE | Â | Â | Â | ag-ISE-ca | Â |
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
5 | ath-miR156f | ag | Â | Â | no-ISE | Â | Â | Â | ag-ISE-ca | Â |
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
6 | ath-miR156g | ag | Â | Â | no ISE | Â | Â | Â | ag-ISE-ca | Â |
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
7 | ath-miR156h | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
8 | ath-miR156j | ag | no ESE | Â | Â | Â | ESE-ag | Â | Â | Â |
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
9 | ath-miR157a | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
10 | ath-miR157b | ag | no ESE | Â | Â | Â | ag-ESE | Â | Â | Â |
ct | Â | Â | ISE (gtgagac) | no -ISS | Â | Â | Â | ct | ||
11 | ath-miR157c | at | no-ESE | Â | Â | Â | ESE-at | Â | Â | Â |
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
12 | ath-miR157d | ct | Â | Â | Â | no ISS | Â | Â | Â | ct |
13 | ath-miR159b | ct | Â | Â | Â | no ISS | Â | Â | Â | ct |
14 | ath-miR159c | ttc | Â | no-ESS | Â | Â | Â | ttc | Â | Â |
15 | ath-miR163 | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
16 | ath-miR164b | ta | no-ESE | Â | Â | Â | ta-ESE | Â | Â | Â |
17 | ath-miR165b | at | no-ESE | Â | Â | Â | at-ESE | Â | Â | Â |
18 | ath-miR167c | ct | Â | Â | no-ISE | Â | Â | Â | ISE-ct | Â |
19 | ath-miR167d | ca | no-ESE | Â | Â | Â | ca-ESE | Â | Â | Â |
at | Â | Â | no-ISE | Â | Â | Â | at-ISE | Â | ||
20 | ath-miR169b | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
 |  | tct |  |  |  | no-ISS |  |  |  | tct |
21 | ath-miR169j | ag | no-ESE | Â | Â | Â | ag | Â | Â | Â |
22 | ath-miR169l | ag | no-ESE | Â | Â | Â | ag | Â | Â | Â |
23 | ath-miR169m | tc | Â | Â | Â | no-ISS | Â | Â | Â | tc |
24 | ath-miR169n | ag | no-ESE | Â | Â | Â | ag | Â | Â | Â |
25 | ath-miR170 | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
26 | ath-miR171a | ca | no-ESE | Â | Â | Â | ca | Â | Â | Â |
tc | Â | Â | Â | no-ISS | Â | Â | Â | tc | ||
ct | Â | Â | Â | no-ISS | Â | Â | Â | ct | ||
27 | ath-miR173 | ag | no-ESE | Â | Â | Â | ag | Â | Â | Â |
28 | ath-miR390b | ctt | Â | no-ESS | Â | Â | ctt | Â | Â | Â |
29 | ath-miR391 | ga | no-ESE | Â | Â | Â | ga-ESE | Â | Â | Â |
tc | Â | Â | Â | no-ISS | Â | Â | Â | tc | ||
ta | no-ESE | Â | Â | Â | ta-ESE | Â | Â | Â | ||
30 | ath-miR394a | at | Â | Â | no-ISE | Â | Â | Â | AT-ISE | Â |
ta | Â | Â | no-ISE | Â | Â | Â | at-ISE-ta | Â | ||
31 | ath-miR394b | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
32 | ath-miR398b | ac | no-ESE | Â | Â | Â | ac | Â | Â | Â |
33 | ath-miR398c | ac | no-ESE | Â | Â | Â | ac | Â | Â | Â |
34 | ath-miR399b | at | no-ESE | Â | Â | Â | ESE-at | Â | Â | Â |
35 | ath-miR399f | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
36 | ath-miR408 | ga | no-ESE | Â | Â | Â | ga-ESE | Â | Â | Â |
tc | Â | Â | Â | no-ISS | Â | Â | Â | tc | ||
37 | ath-miR773b | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
38 | ath-miR777 | ta | Â | Â | no-ISE | Â | Â | Â | ta | Â |
39 | ath-miR781b | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
40 | ath-miR822 | aat | Â | Â | no-ISE | Â | Â | Â | aat | Â |
41 | ath-miR824 | ct | Â | Â | Â | no-ISS | Â | Â | Â | ct |
42 | ath-miR827 | ct | Â | Â | ISE (ttcttttg) | no-ISS | Â | tatt | Â | ct |
43 | ath-miR838 | tct | Â | ESS (tatttatta) | Â | Â | Â | tct | Â | Â |
44 | ath-miR847 | tct | Â | no ESS | Â | Â | Â | tct | Â | Â |
45 | ath-miR855 | ta | Â | Â | ISE (ttctttta) | Â | Â | Â | ISE-ta | Â |
46 | ath-miR857 | tg | Â | ESS (tagacat) | Â | Â | Â | tg | Â | Â |
47 | ath-miR858a | tc | Â | Â | Â | no ISS | Â | Â | Â | tc |
48 | ath-miR858b | at | no ESE | Â | Â | Â | at | Â | Â | Â |
49 | ath-miR859 | tc | Â | Â | Â | no ISS | Â | Â | Â | tc |
50 | ath-miR862 | tg | no ESE | Â | Â | Â | tg-ESE | Â | Â | Â |
51 | ath-miR863 | tatt | Â | no ESS | Â | Â | Â | tatt | Â | Â |
52 | ath-miR1886.1 | ga | Â | Â | no ISE | Â | Â | Â | ga | Â |
53 | ath-miR2111b | gaa | ESE (ggataca) | Â | Â | Â | gaa | Â | Â | Â |
tga | ESE (ggataca) | Â | Â | Â | tga-ESE | Â | Â | Â | ||
54 | ath-miR2936 | ga | ESE (aagaagct) | Â | Â | Â | ga-ESE | Â | Â | Â |
tc | Â | Â | Â | no ISS | Â | Â | Â | tc | ||
tc | Â | Â | Â | no ISS | Â | Â | Â | tc | ||
gcg | ESE (aagaagct) | Â | Â | Â | gcg | Â | Â | Â | ||
55 | ath-miR2937 | gt | no ESE | Â | Â | Â | gt-ESE | Â | Â | Â |
56 | ath-miR3434 | tc | Â | Â | Â | no ISS | Â | Â | Â | tc |
57 | ath-miR4240 | at | Â | Â | no ISE | Â | Â | Â | ISE-at | Â |
58 | ath-miR5025 | at | no ESE | Â | Â | Â | at | Â | Â | Â |
59 | ath-miR5027 | tg | Â | Â | no ISE | Â | Â | Â | tg | Â |
60 | ath-miR5029 | ga | no ESE | Â | Â | Â | ga-ESE | Â | Â | Â |
tc | Â | Â | Â | no ISS | Â | Â | Â | tc | ||
atg | no ESE | Â | Â | Â | atg-ESE | Â | Â | Â | ||
61 | ath-miR5634 | tc | Â | Â | Â | no ISS | Â | Â | Â | tc |
62 | ath-miR5638a | ct | Â | Â | Â | no ISS | Â | Â | Â | ct |
ac | Â | Â | Â | no ISS | Â | Â | Â | ac-ISS | ||
63 | ath-miR5638b | ga | Â | no ESS | Â | Â | Â | ga-ESS | Â | Â |
ct | Â | Â | Â | no ISS | Â | Â | Â | ct | ||
 |  | ac |  |  |  | no ISS |  |  |  | ac-ISS |
 |  | ct |  |  |  | no ISS |  |  |  | ct |
64 | ath-miR5640 | ga | no ESE | Â | Â | Â | ga-ESE | Â | Â | Â |
 |  | ct |  |  |  | no ISS |  |  |  | ct |
65 | ath-miR5641 | tct | Â | no ESS | Â | Â | Â | tct | Â | Â |
66 | ath-miR5647 | ct | Â | Â | Â | no ISS | Â | Â | Â | ct |
 |  | ct |  |  |  | no ISS |  |  |  | ct |
 |  | ct |  |  |  | no ISS |  |  |  | ct |
67 | ath-miR5648 | ta | ESE (gaagaaa) | Â | Â | Â | ESE-ta | Â | Â | Â |
68 | ath-MIR5651 | at | no ESE | Â | Â | Â | at-ESE | Â | Â | Â |
 |  | at | no ESE |  |  |  | ESE-at |  |  |  |
69 | ath-miR5652 | ga | no ESE | Â | Â | Â | ga-ESE | Â | Â | Â |
70 | ath-miR5653 | gttga | Â | no ESS | Â | Â | Â | ESS-gttga | Â | Â |
71 | ath-miR5655 | ag | ESE (gatgaca) | Â | Â | Â | ag | Â | Â | Â |
 |  | ga | ESE (gatgaca) |  |  |  | ga |  |  |  |
 |  | ag | ESE (gatgaca) |  |  |  | ag |  |  |  |
 |  | tc | ESE (gatgaca) |  |  |  | tc |  |  |  |
 |  | tgg |  |  | ISE |  |  |  | ISE-tgg |  |
 |  | gga | ESE (gatgaca) |  |  |  | gga |  |  |  |
 |  | cca | ESE (gatgaca) |  |  |  | cca |  |  |  |
72 | ath-miR5656 | tc | Â | Â | Â | no ISS | Â | Â | Â | tc |
73 | ath-miR5658 | ctt | Â | Â | no ISE | Â | Â | Â | ctt | Â |
 |  | agg |  |  |  | no ISS |  |  |  | ISS-agg |
74 | ath-miR5665 | tat | Â | Â | Â | no ISS | Â | Â | Â | ISS-tat |
75 | ath-miR5997 | agg | no ESE | Â | Â | Â | agg | Â | Â | Â |
76 | ath-miR8166 | ga | no ESE | Â | Â | Â | ga | Â | Â | Â |
77 | ath-MIR8176 | tc | Â | Â | Â | no ISS | Â | Â | Â | tc |
78 | ath-miR8177 | ga | no ESE | Â | Â | Â | ga | Â | Â | Â |
79 | ath-miR8182 | ct | Â | Â | Â | no ISS | Â | Â | Â | ct |