Characterization of the late embryogenesis abundant (LEA) proteins family and their role in drought stress tolerance in upland cotton

Magwanga, Richard Odongo; Lu, Pu; Kirungu, Joy Nyangasi; Lu, Hejun; Wang, Xingxing; Cai, Xiaoyan; Zhou, Zhongli; Zhang, Zhenmei; Salih, Haron; Wang, Kunbo; Liu, Fang

doi:10.1186/s12863-017-0596-1

Table 2 LEA gene in upland cotton, Gossypium hirsutum and their sequence characteristics and subcellular location prediction and chromosome position

From: Characterization of the late embryogenesis abundant (LEA) proteins family and their role in drought stress tolerance in upland cotton

GENE ID	PROTEIN TYPE	GENE ANNOTATION	LENGTH (aa)	Pl	MM(aa)	Chr NO	Start	End	Position	Sub cellular localization
GENE ID	PROTEIN TYPE	GENE ANNOTATION	LENGTH (aa)	Pl	MM(aa)	Chr NO	Start	End	Position	Wolfpsort	Pprowler	TargetP
CotAD_ 04417	DEHYDRIN	DEHYDRIN-4	98	6.33	10,753.6	At_chr08	2,270,863	2,271,159	296	nucl	other	_
CotAD_ 07367	DEHYDRIN	DEHYDRIN-24	1431	6.31	160,755.92	scaffold72.1	2,201,874	2,209,455	7581	plas	other	_
CotAD_ 08352	DEHYDRIN	DEHYDRIN-23	160	5.45	17,797.83	scaffold190.1	910,057	911,647	1590	nucl	other	_
CotAD_ 10,502	DEHYDRIN	DEHYDRIN-8	235	8.18	26,216.65	Dt01_chr15	2,276,230	2,277,176	946	nucl	other	_
CotAD_ 11,398	DEHYDRIN	DEHYDRIN-13	51	6.52	5513.09	Dt06_chr25	776,882	777,140	258	nucl	other	S
CotAD_ 13,947	DEHYDRIN	DEHYDRIN-19	449	4.92	49,643.3	Dt13_chr18	1,193,127	1,196,473	3346	nucl	other	_
CotAD_ 15,928	DEHYDRIN	DEHYDRIN-18	180	7.98	19,341.26	Dt12_chr26	638,305	639,445	1140	nucl	other	_
CotAD_ 16,331	DEHYDRIN	DEHYDRIN-15	128	5.46	14,436.09	Dt08_chr24	877,320	877,836	516	mito	other	_
CotAD_ 19,173	DEHYDRIN	DEHYDRIN-5	180	7.98	19,330.23	At_chr12	883,350	884,512	1162	cyto	other	_
CotAD_ 22,357	DEHYDRIN	DEHYDRIN-2	197	5.48	22,224.51	At_chr02	824,855	825,544	689	chlo	other	_
CotAD_ 27,143	DEHYDRIN	DEHYDRIN-14	135	9.49	14,720.04	Dt07_chr16	115,939	116,435	496	chlo	other	_
CotAD_ 29,610	DEHYDRIN	DEHYDRIN-16	172	5.89	19,224.36	Dt08_chr24	936,161	936,813	652	cyto	other	_
CotAD_ 31,255	DEHYDRIN	DEHYDRIN-10	199	5.5	22,423.72	Dt02_chr14	711,572	712,266	694	chlo	other	_
CotAD_ 35,513	DEHYDRIN	DEHYDRIN-12	161	4.79	17,827.6	Dt05_chr19	393,056	394,685	1629	chlo	other	_
CotAD_ 42,408	DEHYDRIN	DEHYDRIN-20	344	9.01	37,987.42	Dt13_ch18	453,295	454,329	1034	chlo	other	_
CotAD_ 46,550	DEHYDRIN	DEHYDRIN-1	135	9.33	14,717.04	At_chr01	69,396	69,892	496	cyto	other	_
CotAD_ 50,983	DEHYDRIN	DEHYDRIN-9	243	8.82	26,199.73	Dt02_chr14	297,459	298,432	973	cyto	other	_
CotAD_ 53,264	DEHYDRIN	DEHYDRIN-22	211	5.04	23,789.31	scaffold1899.1	95,851	96,576	725	cyto	other	_
CotAD_ 57,587	DEHYDRIN	DEHYDRIN-17	211	5.22	23,654.28	Dt09_chr23	187,778	188,503	725	cyto	other	_
CotAD_ 64,203	DEHYDRIN	DEHYDRIN-6	178	6.48	19,521.14	At_chr13	125,424	126,358	934	chlo	other	_
CotAD_ 65,889	DEHYDRIN	DEHYDRIN-11	608	5.62	67,130.02	Dt03_chr17	396,530	401,988	5458	cyto	other	_
CotAD_ 70,948	DEHYDRIN	DEHYDRIN-21	332	8.46	37,102.53	Dt13_chr18	41,714	42,880	1166	chlo	other	_
CotAD_ 75,267	DEHYDRIN	DEHYDRIN-7	332	8.22	37,096.42	At_chr13	210,365	211,531	1166	nucl	other	_
CotAD_ 75,537	DEHYDRIN	DEHYDRIN-3	533	5.39	58,793.08	At_chr03	254,566	259,519	4953	plas	other	_
CotAD_ 16,594	LEA1	LEA 1–7	115	6.9	13,315.99	Dt13_chr18	1,203,659	1,204,098	439	mito	other	_
CotAD_ 16,595	LEA1	LEA 1–8	115	6.9	13,315.99	Dt13_chr18	1,204,716	1,205,155	439	cyto	other	_
CotAD_ 17,186	LEA1	LEA 1–1	165	5.81	17,459.58	At_chr06	1,273,709	1,274,303	594	plas	other	_
CotAD_ 20,491	LEA1	LEA 1–6	165	6.08	17,343.5	Dt06_chr25	298,147	298,732	585	cyto	other	_
CotAD_ 30,219	LEA1	LEA 1–2	113	6.3	12,106.42	Dt02_chr14	23,536	24,035	499	chlo	other	_
CotAD_ 31,140	LEA1	LEA 1–3	164	9.3	16,871.44	Dt02_chr14	28,053	28,616	563	cyto	other	_
CotAD_ 48,976	LEA1	LEA 1–9	116	8.01	13,437.07	scaffold842.1	284,300	284,742	442	chlo	other	_
CotAD_ 51,667	LEA1	LEA 1–4	164	9.33	16,897.52	Dt02_chr14	443,597	444,162	565	nucl	other	_
CotAD_ 52,203	LEA1	LEA 1–5	420	9.1	45,990.36	Dt02_chr14	444,540	450,345	5805	cyto	other	_
CotAD_ 00275	LEA2	LEA 2–98	274	10.09	29,834.66	Dt09_chr23	2,049,164	2,049,988	824	chlo	other	M
CotAD_ 00465	LEA2	LEA 2–101	304	9.59	33,689.28	Dt09_chr23	3,367,709	3,368,936	1227	chlo	other	M
CotAD_ 00799	LEA2	LEA 2–154	337	8.96	38,982.02	scaffold26.1	2,048,605	2,051,804	3199	golg	other	M
CotAD_ 00808	LEA2	LEA 2–155	226	10.08	26,011.22	scaffold26.1	2,100,130	2,100,810	680	cyto	other	M
CotAD_ 01033	LEA2	LEA 2–105	202	9.06	22,587.14	Dt10_chr20	1,010,984	1,011,592	608	chlo	other	M
CotAD_ 01298	LEA2	LEA 2–107	218	10.22	24,021.4	Dt10_chr20	5,288,414	5,289,070	656	cyto	other	_
CotAD_ 01321	LEA2	LEA 2–108	238	9.54	26,020.28	Dt10_chr20	5,756,514	5,757,230	716	cyto	SP	M
CotAD_ 01385	LEA2	LEA 2–89	247	7	27,497.03	Dt09_chr23	159,994	161,690	1696	cyto	other	_
CotAD_ 01700	LEA2	LEA 2–100	260	9.36	28,399.83	Dt09_chr23	2,815,779	2,816,561	782	cyto	other	_
CotAD_ 02652	LEA2	LEA 2–97	212	10.05	23,764.43	Dt09_chr23	2,032,508	2,033,146	638	mito	other	_
CotAD_ 03037	LEA2	LEA 2–63	262	9.05	28,472.57	Dt05_chr19	1,838,069	1,841,145	3076	cyto	other	_
CotAD_ 03649	LEA2	LEA 2–34	320	9.82	35,345.6	At_chr09	1,775,719	1,776,844	1125	cyto	other	_
CotAD_ 03784	LEA2	LEA 2–75	116	6.82	13,537.66	Dt07_chr16	548,573	548,923	350	chlo	other	_
CotAD_ 05724	LEA2	LEA 2–32	197	10.05	22,442.51	At_chr09	1,755,547	1,756,140	593	chlo	other/SP	_
CotAD_ 05725	LEA2	LEA 2–33	238	9.73	27,552.78	At_chr09	1,759,512	1,760,228	716	nucl	SP	_
CotAD_ 06037	LEA2	LEA 2–115	205	10.07	22,125.81	Dt13_ch18	90,455	91,072	617	chlo	SP	_
CotAD_ 07087	LEA2	LEA2–3	206	9.75	22,853.64	At_chr02	2,101,730	2,102,350	620	plas	other	_
CotAD_ 08181	LEA2	LEA 2–99	202	8.61	22,460.02	Dt09_chr23	2,228,567	2,229,175	608	cyto	SP	_
CotAD_ 08350	LEA2	LEA 2–152	198	5.02	22,266.98	scaffold190.1	904,483	905,252	769	chlo	SP	_
CotAD_ 08837	LEA2	LEA 2–125	245	8.77	26,376.34	scaffold280.1	51,952	53,959	2007	golg	other	_
CotAD_ 09578	LEA2	LEA 2–30	260	9.39	28,406.84	At_chr09	1,173,118	1,173,900	782	chlo	other	_
CotAD_ 09685	LEA2	LEA 2–93	251	10.07	27,153.8	Dt09_chr23	686,730	687,485	755	chlo	SP	C
CotAD_ 09732	LEA2	LEA 2–96	232	9.44	25,906.5	Dt09_chr23	1,174,994	1,175,943	949	chlo	other	_
CotAD_ 10,376	LEA2	LEA 2–48	277	9.92	30,152.74	Dt01_chr15	100,033	100,866	833	chlo	SP	M
CotAD_ 11,658	LEA2	LEA 2–84	263	9.82	29,835.19	Dt08_chr24	199,067	199,858	791	cyto	SP	M
CotAD_ 11,875	LEA2	LEA 2–147	175	6.95	20,070.28	scaffold42.1	647,003	647,530	527	chlo	SP	M
CotAD_ 11,876	LEA2	LEA 2–148	209	10.01	23,563.32	scaffold42.1	677,153	677,782	629	chlo	SP	_
CotAD_ 11,878	LEA2	LEA 2–149	226	9.49	25,841.73	scaffold42.1	688,643	689,323	680	chlo	SP	_
CotAD_ 11,879	LEA2	LEA 2–150	129	9.45	15,037.05	scaffold42.1	690,007	690,396	389	chlo	SP	_
CotAD_ 12,375	LEA2	LEA 2–25	190	8.59	21,328.78	At_chr09	106,696	107,358	662	chlo	SP	_
CotAD_ 13,115	LEA2	LEA 2–86	192	9.42	20,770.35	Dt08_chr24	1,183,052	1,183,630	578	extr	SP	_
CotAD_ 13,584	LEA2	LEA 2–67	250	9.96	28,048.83	Dt06_chr25	364,402	365,154	752	golg	SP	_
CotAD_ 13,827	LEA2	LEA 2–114	360	7.87	40,945.87	Dt12_chr26	971,427	972,748	1321	E.R.	mTP	C
CotAD_ 14,147	LEA2	LEA 2–16	212	9.94	23,855.54	At_chr07	774,151	774,789	638	mito	SP	S
CotAD_ 15,892	LEA2	LEA 2–112	307	7.7	34,741.21	Dt12_chr26	406,661	409,153	2492	chlo	mTP	_
CotAD_ 16,731	LEA2	LEA 2–94	258	10.01	28,519.44	Dt09_chr23	724,944	725,720	776	chlo	other	_
CotAD_ 17,044	LEA2	LEA 2–17	151	4.84	16,422.87	At_chr07	972,098	972,634	536	cyto	SP	S
CotAD_ 17,045	LEA2	LEA 2–18	219	9.79	23,930.18	At_chr07	992,750	993,409	659	cyto	SP	_
CotAD_ 17,062	LEA2	LEA 2–19	244	9.78	27,393.16	At_chr07	1,176,161	1,176,895	734	chlo	mTP	C
CotAD_ 17,101	LEA2	LEA 2–9	222	9.26	25,294.09	At_chr06	94,601	95,269	668	mito	SP	S
CotAD_ 17,102	LEA2	LEA 2–10	209	10.35	23,661.48	At_chr06	122,145	122,774	629	nucl	SP	_
CotAD_ 17,103	LEA2	LEA 2–11	265	6.7	30,299.29	At_chr06	134,827	135,702	875	mito	SP	C
CotAD_ 17,649	LEA2	LEA 2–37	235	8.5	26,726.9	At_chr10	359,189	361,440	2251	chlo	SP	_
CotAD_ 18,210	LEA2	LEA 2–141	203	10.17	22,501.33	scaffold377.1	414,366	414,977	611	cyto	SP	C
CotAD_ 18,233	LEA2	LEA 2–145	203	10.08	22,406.26	scaffold377.1	560,351	560,962	611	chlo	SP	_
CotAD_ 18,546	LEA2	LEA 2–95	173	9.91	19,695.85	Dt09_chr23	893,109	893,715	606	chlo	mTP	M
CotAD_ 18,729	LEA2	LEA 2–142	277	9.92	30,227.97	scaffold336.1	433,013	433,846	833	chlo	SP	_
CotAD_ 19,078	LEA2	LEA 2–42	216	9.83	24,007.7	At_chr12	18,103	18,753	650	nucl	other	_
CotAD_ 19,107	LEA2	LEA 2–43	183	9.04	20,031.24	At_chr12	312,977	313,528	551	chlo	SP	C
CotAD_ 19,205	LEA2	LEA 2–46	297	6.83	33,395.7	At_chr12	1,142,954	1,145,475	2521	chlo	SP	S
CotAD_ 19,213	LEA2	LEA 2–38	100	9.64	11,538.35	At_chr10	410,401	410,703	302	chlo	mTP	_
CotAD_ 19,214	LEA2	LEA 2–39	181	9.32	20,628.72	At_chr10	411,491	412,036	545	nucl	SP	S
CotAD_ 19,375	LEA2	LEA 2–111	225	8.57	25,956.2	Dt11_chr21	1,023,165	1,023,842	677	golg	mTP	C
CotAD_ 20,020	LEA2	LEA 2–13	250	9.89	27,947.68	At_chr06	997,148	997,900	752	mito	SP	_
CotAD_ 20,308	LEA2	LEA 2–72	191	9.56	21,054.44	Dt06_chr25	1,390,037	1,390,612	575	chlo	cTP	C
CotAD_ 21,731	LEA2	LEA 2–62	244	9.83	27,381.21	Dt05_chr19	1,524,633	1,525,367	734	nucl	other	_
CotAD_ 21,924	LEA2	LEA 2–110	262	10.16	28,411.4	Dt11_chr21	855,130	855,918	788	nucl	SP	S
CotAD_ 23,646	LEA2	LEA 2–74	204	9.81	21,921.93	Dt07_chr16	34,227	34,841	614	nucl	SP	_
CotAD_ 24,019	LEA2	LEA 2–71	203	10.04	22,391.06	Dt06_chr25	652,496	653,107	611	mito	SP	S
CotAD_ 24,497	LEA2	LEA 2–106	263	8.64	29,247.79	Dt10_chr20	1,715,959	1,719,093	3134	chlo	other	_
CotAD_ 24,499	LEA2	LEA 2–138	175	7.66	20,026.25	scaffold238.1	343,833	344,360	527	chlo	SP	_
CotAD_ 25,271	LEA2	LEA 2–139	209	10.01	23,559.33	scaffold238.1	356,524	357,153	629	nucl	SP	_
CotAD_ 26,038	LEA2	LEA 2–140	226	9.43	25,852.71	scaffold238.1	383,318	383,998	680	chlo	SP	S
CotAD_ 26,981	LEA2	LEA 2–26	274	10.09	29,936.66	At_chr09	239,371	240,195	824	chlo	other	_
CotAD_ 27,453	LEA2	LEA 2–131	239	9.76	26,994.13	scaffold477.1	176,874	179,526	2652	mito	SP	_
CotAD_ 27,789	LEA2	LEA 2–151	184	9.41	20,135.39	scaffold699.1	759,396	759,950	554	E.R.	SP	M
CotAD_ 28,249	LEA2	LEA 2–27	150	9.24	16,764.6	At_chr09	274,309	275,011	702	nucl	SP	_
CotAD_ 28,252	LEA2	LEA 2–13	222	8.65	24,982.77	At_chr07	296,696	299,063	2367	mito	other	_
CotAD_ 28,872	LEA2	LEA 2–57	257	9.1	26,949.97	Dt03_chr17	1,936,828	1,937,663	835	nucl	SP	_
CotAD_ 29,279	LEA2	LEA 2–116	305	9.66	34,588.47	Dt13_chr18	639,522	641,549	2027	chlo	SP	_
CotAD_ 31,344	LEA2	LEA 2–132	101	5.51	11,711.01	scaffold1346.1	193,028	193,333	305	chlo	other	_
CotAD_ 31,535	LEA2	LEA 2–8	240	7.89	27,649.86	At_chr05	790,866	791,588	722	vacu	other	_
CotAD_ 31,536	LEA2	LEA 2–136	210	9.19	23,875.63	scaffold1346.1	213,521	214,153	632	plas	SP	_
CotAD_ 31,537	LEA2	LEA 2–133	254	10.22	27,558.52	scaffold1841.1	200,526	201,290	764	nucl	cTP	C
CotAD_ 31,780	LEA2	LEA 2–87	310	9.93	34,525.38	Dt08_chr24	1,487,296	1,488,516	1220	chlo	other	_
CotAD_ 31,782	LEA2	LEA 2–90	210	7.72	23,638.39	Dt09_chr23	194,606	195,238	632	chlo	SP	_
CotAD_ 31,860	LEA2	LEA 2–153	206	9.82	22,839.69	scaffold257.1	1,162,406	1,163,026	620	cyto	SP	_
CotAD_ 31,906	LEA2	LEA 2–137	232	9.66	26,256.38	scaffold769.1	292,760	295,431	2671	cyto	mTP	M
CotAD_ 31,936	LEA2	LEA 2–53	152	4.74	16,462.97	Dt01_chr15	598,039	598,839	800	mito	SP	_
CotAD_ 32,487	LEA2	LEA 2–36	305	9.97	33,718.76	At_chr11	169,902	171,217	1315	mito	other	_
CotAD_ 32,645	LEA2	LEA 2–66	199	9.3	22,785.41	Dt06_chr25	246,850	247,449	599	chlo	SP	C
CotAD_ 32,847	LEA2	LEA 2–24	249	9.79	27,707.74	At_chr09	61,155	61,904	749	extr	cTP	C
CotAD_ 33,143	LEA2	LEA 2–54	305	9.63	34,544.43	Dt02_chr14	1,894,174	1,896,197	2023	chlo	SP	_
CotAD_ 33,144	LEA2	LEA 2–60	240	8.49	27,655.92	Dt05_chr19	151,373	152,095	722	chlo	SP	S
CotAD_ 34,476	LEA2	LEA 2–92	320	9.92	35,579.84	Dt09_chr23	448,827	449,952	1125	cyto	SP	_
CotAD_ 34,798	LEA2	LEA 2–68	222	9.23	25,253.03	Dt06_chr25	385,794	386,462	668	nucl	SP	_
CotAD_ 35,069	LEA2	LEA 2–69	209	10.25	23,628.4	Dt06_chr25	396,513	397,142	629	chlo	SP	_
CotAD_ 35,091	LEA2	LEA 2–70	288	7.1	32,755.52	Dt06_chr25	403,729	404,595	866	extr	SP	_
CotAD_ 35,514	LEA2	LEA 2–61	206	5.9	23,420.27	Dt05_chr19	399,904	400,524	620	mito	SP	C
CotAD_ 36,328	LEA2	LEA 2–144	450	4.92	49,131.5	scaffold821.1	548,888	550,240	1352	chlo	other	_
CotAD_ 36,446	LEA2	LEA 2–78	231	9.47	24,949.39	Dt08_chr24	58,782	59,477	695	chlo	other	_
CotAD_ 36,583	LEA2	LEA 2–146	206	8.88	22,761.2	scaffold821.1	625,818	626,438	620	chlo	other	_
CotAD_ 37,776	LEA2	LEA 2–91	202	9.02	22,357.93	Dt09_chr23	337,931	338,539	608	chlo	SP	S
CotAD_ 37,888	LEA2	LEA 2–21	283	10.15	31,410.18	At_chr08	2,313,418	2,314,578	1160	chlo	other	_
CotAD_ 38,978	LEA2	LEA 2–85	210	9.76	22,644.27	Dt08_chr24	376,609	377,241	632	nucl	SP	S
CotAD_ 39,064	LEA2	LEA 2–50	210	9.48	23,699.74	Dt01_chr15	220,837	221,469	632	chlo	other	_
CotAD_ 39,719	LEA2	LEA 2–52	191	6.29	20,961.07	Dt01_chr15	397,156	397,731	575	nucl	mTP	_
CotAD_ 40,324	LEA2	LEA 2–15	204	9.81	21,780.76	At_chr07	720,430	721,044	614	plas	SP	_
CotAD_ 41,569	LEA2	LEA 2–47	208	10.19	22,559.45	At_chr13	343,514	344,140	626	chlo	other	_
CotAD_ 41,571	LEA2	LEA 2–88	270	9.56	30,627.54	Dt09_chr23	64,512	65,324	812	chlo	SP	_
CotAD_ 41,925	LEA2	LEA 2–128	188	9.22	21,941.4	scaffold1231.1	94,270	94,836	566	nucl	other	_
CotAD_ 42,599	LEA2	LEA 2–129	373	9.9	43,118.75	scaffold1231.1	96,297	98,517	2220	cyto	Other	M
CotAD_ 44,357	LEA2	LEA 2–143	210	9.34	23,874.6	scaffold1088.1	451,853	452,485	632	cyto	other	C
CotAD_ 45,324	LEA2	LEA 2–109	256	9.99	28,431.93	Dt11_chr21	55,317	61,829	6512	chlo	other	_
CotAD_ 46,873	LEA2	LEA 2–29	259	10	28,603.52	At_chr09	355,476	356,255	779	vacu	other	_
CotAD_ 47,322	LEA2	LEA2–5	220	9.85	24,666.72	At_chr03	430,461	431,123	662	chlo	SP	_
CotAD_ 47,454	LEA2	LEA 2–130	661	6.14	73,583.12	scaffold1851.1	116,914	132,924	16,010	cysk	SP	C
CotAD_ 47,495	LEA2	LEA 2–76	318	10.09	35,234.15	Dt07_chr16	1,185,327	1,186,479	1152	chlo	SP	S
CotAD_ 47,749	LEA2	LEA 2–77	251	9.41	27,769.63	Dt07_chr16	1,400,323	1,401,078	755	chlo	mTP	M
CotAD_ 48,050	LEA2	LEA 2–103	217	9.28	24,968.87	Dt10_chr20	968,935	969,588	653	mito	other	_
CotAD_ 48,069	LEA2	LEA 2–104	181	9.57	20,577.73	Dt10_chr20	970,347	970,892	545	extr	SP	S
CotAD_ 48,336	LEA2	LEA 2–58	211	9.12	23,479.93	Dt04_chr22	552,418	553,053	635	nucl	SP	_
CotAD_ 48,753	LEA2	LEA 2–12	210	9.28	23,676.69	At_chr06	482,445	483,077	632	mito	SP	_
CotAD_ 48,769	LEA2	LEA 2–28	304	9.56	33,675.21	At_chr09	334,020	335,245	1225	nucl	SP	_
CotAD_ 49,818	LEA2	LEA 2–119	317	4.63	35,274.16	scaffold2616.1	21,219	22,172	953	cyto	SP	_
CotAD_ 53,045	LEA2	LEA 2–102	206	7.58	22,650.27	Dt10_chr20	363,682	364,302	620	cyto	cTP	C
CotAD_ 53,263	LEA2	LEA 2–23	251	10.11	27,168.81	At_chr09	24,397	25,152	755	chlo	SP	_
CotAD_ 53,981	LEA2	LEA 2–123	247	6.59	27,715.29	scaffold3326.1	42,209	43,944	1735	mito	cTP	C
CotAD_ 54,337	LEA2	LEA 2–14	152	4.84	16,453.02	At_chr07	366,521	367,321	800	chlo	SP	S
CotAD_ 55,224	LEA2	LEA 2–55	210	9.66	23,769.83	Dt03_chr17	607,531	608,163	632	mito	SP	M
CotAD_ 56,356	LEA2	LEA 2–22	173	9.96	19,737.98	At_chr09	18,712	19,318	606	chlo	SP	S
CotAD_ 56,696	LEA2	LEA 2–56	213	9.51	23,750.48	Dt03_chr17	634,717	635,358	641	nucl	SP	_
CotAD_ 58,358	LEA2	LEA 2–113	209	10.19	23,626.51	Dt12_ch26	897,133	897,762	629	chlo	SP	S
CotAD_ 59,405	LEA2	LEA 2–61	320	9.9	35,457.72	Dt05_chr19	251,378	252,501	1123	chlo	SP	S
CotAD_ 60,279	LEA2	LEA 2–124	247	8.76	26,619.63	scaffold2414.1	50,037	52,048	2011	chlo	SP	_
CotAD_ 60,435	LEA2	LEA2–1	251	9.57	27,952.81	At_chr01	137,428	138,183	755	chlo	cTP	C
CotAD_ 60,617	LEA2	LEA 2–49	210	9.51	23,780.9	Dt01_chr15	198,189	198,821	632	mito	SP	_
CotAD_ 61,173	LEA2	LEA2–7	215	9.84	24,043	At_chr04	59,864	60,511	647	chlo	cTP	_
CotAD_ 61,391	LEA2	LEA 2–51	191	6.29	20,884.97	Dt01_chr15	284,374	284,949	575	chlo	SP	C
CotAD_ 62,996	LEA2	LEA2–2	318	9.95	35,356.25	At_chr01	176,895	178,045	1150	nucl	SP	_
CotAD_ 63,174	LEA2	LEA 2–117	377	9.77	41,228.93	scaffold3177.1	19,137	21,221	2084	E.R.	SP	C
CotAD_ 64,004	LEA2	LEA 2–73	219	9.65	23,825.02	Dt07_chr16	34,198	34,857	659	chlo	other	_
CotAD_ 64,120	LEA2	LEA 2–41	218	10.14	24,050.43	At_chr12	951	1607	656	chlo	SP	_
CotAD_ 64,346	LEA2	LEA 2–64	210	8.99	23,572.5	Dt06_chr25	59,643	60,275	632	chlo	SP	_
CotAD_ 64,347	LEA2	LEA 2–65	235	9.44	26,111.93	Dt06_chr25	62,524	63,231	707	plas	cTP	C
CotAD_ 64,657	LEA2	LEA 2–40	262	10.22	28,516.58	At_chr11	144,295	145,083	788	vacu	SP	_
CotAD_ 65,119	LEA2	LEA 2–79	206	8.88	22,733.19	Dt08_chr24	59,660	60,280	620	golg	SP	_
CotAD_ 65,370	LEA2	LEA 2–126	326	9.99	36,098.18	scaffold3528.1	84,696	86,784	2088	chlo	other	_
CotAD_ 66,245	LEA2	LEA 2–82	450	4.94	48,836.2	Dt08_chr24	121,249	122,601	1352	chlo	other	_
CotAD_ 66,538	LEA2	LEA2–6	211	9.47	23,424.96	At_chr04	59,282	59,917	635	chlo	SP	_
CotAD_ 66,551	LEA2	LEA 2–118	225	9.28	25,226.24	scaffold3976.1	20,354	21,031	677	cyto	other	_
CotAD_ 66,774	LEA2	LEA 2–80	216	9.92	24,090.84	Dt08_chr24	68,424	69,074	650	chlo	SP	_
CotAD_ 66,775	LEA2	LEA 2–81	225	9.61	25,078.29	Dt08_chr24	72,945	73,622	677	chlo	SP	S
CotAD_ 67,823	LEA2	LEA 2–20	222	9.49	23,928.26	At_chr08	132,953	133,621	668	cyto	SP	S
CotAD_ 68,063	LEA2	LEA2–4	218	9.3	23,245.72	At_chr03	191,498	192,154	656	cyto	SP	_
CotAD_ 68,189	LEA2	LEA 2–35	206	6.71	22,579.21	At_chr10	67,607	68,227	620	chlo	cTP	C
CotAD_ 69,737	LEA2	LEA 2–134	213	9.75	23,867.69	scaffold2095.1	202,243	202,884	641	chlo	SP	S
CotAD_ 69,738	LEA2	LEA 2–135	210	9.88	23,893.04	scaffold2095.1	208,893	209,525	632	chlo	SP	_
CotAD_ 70,003	LEA2	LEA 2–42	191	9.63	20,942.44	At_chr12	171,793	172,368	575	cyto	cTP	C
CotAD_ 70,190	LEA2	LEA 2–120	430	4.81	48,185.02	scaffold4817.1	31,921	37,140	5219	cyto	other	_
CotAD_ 70,192	LEA2	LEA 2–122	130	4.74	14,420.49	scaffold4817.1	38,397	38,789	392	nucl	SP	M
CotAD_ 71,431	LEA2	LEA 2–59	186	9.58	20,579.98	Dt05_chr19	65,530	66,090	560	extr	other	_
CotAD_ 72,458	LEA2	LEA 2–127	192	9.54	20,613.31	scaffold3083.1	91,828	92,406	578	cysk	SP	_
CotAD_ 72,913	LEA2	LEA 2–121	315	4.63	35,071.89	scaffold4398.1	34,689	36,390	1701	cysk	SP	_
CotAD_ 73,966	LEA2	LEA 2–45	320	9.96	35,484.73	At_chr12	365,460	366,583	1123	chlo	other	_
CotAD_ 74,713	LEA2	LEA 2–83	211	9.12	23,479.93	Dt08_chr24	158,342	158,977	635	golg	other	_
CotAD_ 76,129	LEA2	LEA 2–44	209	10.19	23,626.51	At_chr12	317,009	317,638	629	chlo	other	_
CotAD_ 01504	LEA3	LEA 3–13	93	8.82	10,469.06	Dt09_chr23	1,171,108	1,171,516	408	chlo	other	C
CotAD_ 04558	LEA3	LEA 3–1	100	9.75	10,627.15	At_chr04	288,394	288,796	402	chlo	mTP	S
CotAD_ 04559	LEA3	LEA 3–2	100	9.34	10,419.9	At_chr04	291,007	291,400	393	chlo	SP	S
CotAD_ 21,416	LEA3	LEA 3–9	92	9.83	9667.02	Dt04_chr22	127,037	127,390	353	chlo	mTP	C
CotAD_ 22,634	LEA3	LEA 3–11	100	9.18	10,503.02	Dt04_chr22	853,079	853,496	417	mito	SP	S
CotAD_ 23,118	LEA3	LEA 3–12	99	9.56	10,350.8	Dt04_chr22	855,441	855,830	389	cyto	mTP	S
CotAD_ 24,498	LEA3	LEA 3–8	126	6.27	13,502.83	Dt03_chr17	1,079,773	1,082,222	2449	chlo	mTP	M
CotAD_ 26,668	LEA3	LEA 3–16	98	9.34	10,595.99	scaffold141.1	891,415	891,795	380	chlo	mTP	M
CotAD_ 33,003	LEA3	LEA 3–15	120	7.02	13,729.35	scaffold944.1	428,674	429,107	433	chlo	mTP	M
CotAD_ 35,021	LEA3	LEA 3–5	85	9.77	9781.28	At_chr11	537,390	537,732	342	chlo	mTP	M
CotAD_ 36,999	LEA3	LEA 3–4	126	6.27	13,484.86	At_chr08	1,181,217	1,183,629	2412	cyto	mTP	M
CotAD_ 40,972	LEA3	LEA 3–7	124	9.51	14,155.5	At_chr13	122,903	123,887	984	chlo	mTP	M
CotAD_ 41,714	LEA3	LEA 3–14	105	9.3	11,363.76	Dt11_chr21	445,383	445,797	414	chlo	mTP	M
CotAD_ 43,605	LEA3	LEA 3–3	92	9.75	9709.1	At_chr04	475,252	475,623	371	nucl	mTP	C
CotAD_ 46,270	LEA3	LEA 3–6	105	9.51	11,449.87	At_chr11	673,169	673,590	421	golg	mTP	S
CotAD_ 56,728	LEA3	LEA 3–10	98	9.66	10,549.99	Dt04_chr22	520,431	520,811	380	golg	mTP	S
CotAD_ 00667	LEA4	LEA 4–12	239	9.03	26,335.09	scaffold26.1	961,112	961,910	798	chlo	cTP	C
CotAD_ 02872	LEA4	LEA 4–4	569	5.89	62,916.57	Dt05_chr19	496,264	498,058	1794	mito	other	_
CotAD_ 05963	LEA4	LEA 4–5	266	5.2	29,264.99	Dt05_chr19	2,777,842	2,778,935	1093	extr	SP	S
CotAD_ 09404	LEA4	LEA 4–7	127	9.21	13,553.37	Dt07_chr16	2,927,050	2,928,024	974	chlo	cTP	C
CotAD_ 09405	LEA4	LEA 4–8	109	9.96	12,066.81	Dt07_chr16	2,946,007	2,947,047	1040	chlo	mTP	M
CotAD_ 10,044	LEA4	LEA 4–3	634	5.78	68,352.06	At_chr07	513,343	515,454	2111	nucl	mTP	_
CotAD_ 13,989	LEA4	LEA 4–10	109	10.04	12,094.87	Dt13_chr18	1,907,725	1,908,766	1041	chlo	mTP	M
CotAD_ 22,633	LEA4	LEA 4–6	136	6.93	14,614.04	Dt06_chr25	240,527	241,024	497	chlo	other	_
CotAD_ 23,824	LEA4	LEA 4–9	405	5.88	44,549.64	Dt12_chr26	2,459,614	2,460,913	1299	chlo	other	_
CotAD_ 50,359	LEA4	LEA4–1	284	5.13	31,311.17	At_chr03	809,118	810,165	1047	cyto	SP	S
CotAD_ 62,314	LEA4	LEA 4–11	239	9.03	26,258.97	scaffold3310.1	9965	10,763	798	cyto	cTP	C
CotAD_ 62,659	LEA4	LEA4–2	568	5.96	62,738.55	At_chr06	14,807	16,597	1790	cyto	other	_
CotAD_ 74,061	LEA4	LEA 4–4	405	5.69	44,521.59	At_chr12	408,138	409,436	1298	nucl	other	_
CotAD_ 03264	LEA5	LEA 5–4	110	5.55	11,915.92	Dt06_chr25	1,093,153	1,093,598	445	nucl	other	_
CotAD_ 07516	LEA5	LEA 5–2	123	5.78	13,999.94	At_chr09	1,687,267	1,687,988	721	cyto	other	_
CotAD_ 22,539	LEA5	LEA 5–9	102	5.49	11,072.09	scaffold613.1	610,955	611,364	409	chlo	other	_
CotAD_ 31,869	LEA5	LEA 5–8	102	5.49	11,072.09	scaffold1551.1	323,034	323,444	410	nucl	other	_
CotAD_ 33,321	LEA5	LEA 5–7	110	5.55	11,972.03	scaffold1788.1	214,115	214,558	443	chlo	other	_
CotAD_ 46,888	LEA5	LEA 5–1	144	7.76	16,526.85	At_chr08	563,572	564,774	1202	chlo	other	_
CotAD_ 48,469	LEA5	LEA 5–5	171	8.39	19,503.27	Dt08_chr24	159,604	160,805	1201	nucl	other	_
CotAD_ 56,699	LEA5	LEA 5–6	94	8.1	10,073.96	Dt10_chr20	81,020	81,398	378	chlo	other	_
CotAD_ 57,519	LEA5	LEA 5–3	94	8.1	10,073.96	At_chr12	153,745	154,123	378	vacu	other	_
CotAD_ 13,789	LEA6	LEA 6–3	86	7.8	9580.48	Dt12_chr26	651,517	651,777	260	nucl	other	_
CotAD_ 19,623	LEA6	LEA6–1	94	4.76	10,176.98	At_chr01	1,336,340	1,336,624	284	extr	other	_
CotAD_ 44,941	LEA6	LEA 6–4	114	11.83	11,963.43	scaffold3339.1	62,119	62,571	452	cyto	other	_
CotAD_ 53,438	LEA6	LEA 6–2	94	4.75	10,257.11	Dt07_chr16	78,654	78,938	284	chlo	SP	M
CotAD_ 11,594	SMP	SMP-10	264	4.85	26,898.86	scaffold189.1	992,496	993,467	971	cyto	other	_
CotAD_ 12,680	SMP	SMP-3	169	4.63	17,180.76	At_chr07	1,633,754	1,634,391	637	cyto	other	_
CotAD_ 12,681	SMP	SMP-4	144	4.61	14,950.53	At_chr07	1,636,123	1,636,635	512	chlo	other	_
CotAD_ 12,682	SMP	SMP-5	258	4.56	26,168.03	At_chr07	1,639,467	1,640,458	991	cyto	other	_
CotAD_ 39,233	SMP	SMP-7	171	4.49	17,755.88	Dt13_chr18	1,963,715	1,964,463	748	chlo	other	_
CotAD_ 43,455	SMP	SMP-6	261	4.79	26,971.01	Dt12_chr26	1,316,599	1,317,706	1107	chlo	other	_
CotAD_ 45,390	SMP	SMP-1	252	6.35	26,222.21	At_chr01	335,790	337,578	1788	chlo	other	_
CotAD_ 51,205	SMP	SMP-9	253	6.46	26,151.04	scaffold1984.1	277,433	279,262	1829	chlo	other	_
CotAD_ 66,708	SMP	SMP-2	258	6.44	27,923.82	At_chr04	123,169	126,337	3168	cyto	other	_
CotAD_ 67,721	SMP	SMP-8	264	4.93	26,885.82	scaffold4155.1	34,277	35,248	971	cyto	other	_

LEA: late embryogenesis abundant protein; LEA1, 2, 3, 4, 5 and 6 indicates the sub families of LEA proteins while the −1, −2,-3…. Represents the protein annotation number i.e. LEA1–1, the first member of LEA1 sub family; SMP: seed maturation protein; chlo: chloroplast; cyto: cytoplasm; extr: extracellular part of the cell; nucl: nucleus; mito: mitochondrion; cysk: cytoskeleton; golg: golgi body; vacu: vacuole; plas: plasma membrane; E.R: endoplasmic reticulum; SP: Secretory pathway (presence of a signal peptide); mTP: mitochondrial targeting peptide; cTP: chloroplast transit peptide; Other (nucleus, cytoplasmic, or otherwise). C: cytoplasm; S: secretory pathway; M: mitochondrion and -: others/other cell organelles; chr: chromosome; Dt: sub genome D and At: sub-genome A

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