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Table 4 QTLs detected at two or more different stages of seedling growth

From: Detection of QTLs for seedling characteristics in barley (Hordeum vulgare L.) grown under hydroponic culture condition

Traitsa

Chr.b

Pos.c

Left Markerd

Right Markerd

LOD

PVEf

Addg

S1e

S2

S3

S4

S1

S2

S3

S4

Mean

S1

S2

S3

S4

SH

2H

123

2_514353957

2HL_13648618

10.14

10.54

9.07

9.55

18.61

17.74

19.06

22.05

19.37

1.53

1.83

1.79

2.29

3H

30/32

3HL_29995337

3HL_32354397

7.03

7.33

5.54

 

13.49

11.77

10.92

 

12.06

1.31

1.47

1.37

 

SFW

2H

59

2HS_30524211

2HS_17957603

  

3.04

3.64

  

9.30

10.78

10.04

  

−0.12

−0.22

2H

129

2HL_34260490

2_524782265

10.55

 

8.06

9.26

25.71

 

27.06

30.50

27.76

0.05

 

0.22

0.40

LAG

2H

162

2HL_18227895

2_579576154

 

10.31

8.81

  

26.10

26.84

 

26.47

 

0.13

0.21

 

MRL

2H

70

2HL_18957514

2HL_20952058

  

4.09

3.27

  

10.58

8.08

9.33

  

−1.21

−1.01

2H

139

2HL_766321

2_544135082

  

6.06

5.42

  

16.23

13.86

15.05

  

1.54

1.36

3H

80

3HL_39880616

3_440999767

  

4.58

3.28

  

12.65

8.78

10.72

  

−1.27

−1.02

7H

25

7HL_2460896

7HL_27281835

3.69

4.04

  

13.16

12.92

  

13.04

0.75

0.88

  
  1. aTrait abbreviations refer to Table 6
  2. bChromosome
  3. cGenetic distance (in centimorgan) of each QTL from the top of the corresponding chromosome
  4. dMarkers in bold indicated the nearest ones linked to putative QTLs
  5. eS1 to S4 represented 13th, 20th, 27th and 34th day after germination, respectively
  6. fThe phenotypic variation explained (in %) by each QTL
  7. gAdditive effect, positive values indicated that the alleles from Huadamai 6 increased trait values