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Table 2 Simulation settings for estimating power

From: Generalized disequilibrium test for association in qualitative traits incorporating imprinting effects based on extended pedigrees

A Haplotype frequencies

 LD setting

DM1

dM1

DM2

dM2

LD

  LD1

0.130

0.020

0.120

0.730

0.0925

  LD2

0.230

0.120

0.020

0.630

0.1425

  LD3

0.220

0.030

0.030

0.720

0.1575

B Penetrances and imprinting effect models

 Imprinting effect model

f2

f10

f01

f0

RR

  No

0.390

0.325

0.325

0.260

1.500

0.440

0.340

0.340

0.240

1.833

0.480

0.350

0.350

0.220

2.182

  Incomplete

0.390

0.370

0.280

0.260

1.500

0.440

0.420

0.260

0.240

1.833

0.480

0.460

0.240

0.220

2.182

  Complete

0.390

0.390

0.260

0.260

1.500

0.440

0.440

0.240

0.240

1.833

0.480

0.480

0.220

0.220

2.182