Identification of putative markers linked to grain plumpness in rice (Oryza sativa L.) via association mapping

BMC Genomic Data

Table 4 Elite alleles with positive phenotypic effects for GP and typical carrier varieties

Marker	PVE^a (%)	Elite allele (bp)	Phenotypic effect value (%)							Typical carrier variety
			YF^b		XF^c		JEF^d		Mean
			2013	2014	2013	2014	2013	2014	Mean
RM5340	16.7	95	0.29	0.65					0.47	Yuedao 5
		155	1.94	1.77					1.86	Yazihuang
		205	2.36	2.51					2.44	Yuedao 22
RM5480	8.42	165			1.8		1.72	1.86	1.79	Yuedao 5
RM5480	8.42	200			0.87		1.75	1.34	1.32	Ligengqing
RM148	9.93	125			1.34	1.29			1.32	Huangsanshi
RM505	17.13	160			2.15	1.76			1.96	Qiutiandaxiedao
		170			2.74	2.49			2.62	Maozitou
		180			0.47	0.47			0.47	Chiguhong
RM1235	8.76	120		0.52		1.63	1.63		1.26	Yuedao 5
RM511	13.15	130					2.48	2.3	2.39	Qiaobinghuang
RM511	13.15	135					0.32	0.25	0.28	Yuedao 5
RM5479	21.46	210					1.77	1.88	1.83	Ligengqing
		215					2.72	2.23	2.48	Zaoguangtou
		225					0.58	0.83	0.7	Yuedao 5

^a PVE Percentage of phenotypic variation explained, ^b YF Yuanyang Farm, ^c XF Xinyang Farm, ^d JEF Jiangpu Experimental Farm

ISSN: 2730-6844