Fig. 2
From: Fine mapping of a QTL affecting levels of skatole on pig chromosome 7
Region plot of the single marker associations between SSC7 SNPs and skatole in Duroc. Test statistics (LogLikelihood (LRT) scores) is shown along the y axis and physical position in MegaBases (Mb) is shown along the x axis together with genes holding significant SNPs. A complete list of genes in the region can be found in Additional file 3. The threshold of significance is indicated as a dashed line (p = 0.01). Linkage Disequilibrium (r2) between SNPs as estimated by Haploview is plotted below and haplotype block is indicated in red. The darker shades of black represent stronger r2