Locus | SSAN | Primer sequence (5′-3′) | Repeat motifs | Expected size | Observed repeat Motifs | Allele size rangea | |
---|---|---|---|---|---|---|---|
Afco_2 | JX422069.1 | F | TTGACTTGGGTATGGCAAAA | (AG)13 | 230 | - | 212–242 |
R | AAGGTCGAGCAGGAGTAGCA | ||||||
Afco_3 | JX422068.1 | F | GAATTCATGTTCTTGAGAAAAGTTTG | (AG)7 | 198 | (GA)2 | 191–200 |
R | GCCAAATGAACGGACAGATT | ||||||
Afco_5 | JX422066.1 | F | TGACTCCAAACTTGCAGGAG | (CT)8 | 160 | (CT)12 | 160–171 |
R | AGCAGATCAATGCACGTGAG | ||||||
Afco_6 | JX422065.1 | F | TCGACATGAAATCCCTACGAGA | (AG)15 | 243 | (AG)12 | 230–253 |
R | GAGCTGTGAAGTGAAAGGGC | ||||||
Afco_8 | JX422063.1 | F | GCTAACTTGTCTTTCCTATTTCTCC | (CT)13 | 239 | * | 229–245 |
R | TGGAAGCTGCATTCACTGAG | ||||||
Afco_11 | JX422060.1 | F | AATGCTTCTAGCTGGTTCGAC | (GT)7 | 241 | (GT)6 | 240–260 |
R | CCTTGAATTTTATATTTCTTCCAGATG | ||||||
Afco_14 | JX422057.1 | F | CCTTCCACGGTGTCTCATTT | (GA)19 | 281 | (GA)10 | 280–285 |
R | TCATCCAAAACTTCAATCATGG | ||||||
Afco_15 | JX422056.1 | F | ATCGATGGGATCGCCTTAC | (GA)19 | 292 | (GA)9 | 256–262 |
R | GACGTCACGAATGTTGGTTG | ||||||
Afco_19 | JX422052.1 | F | CAGACGAGAGGAGGGAGATG | (GA)17 | 373 | (GA)9 | 356–364 |
R | CTCTGTGAGCCGTTCAATCC | ||||||
Afco_21 | JX422050.1 | F | CGACAAGGAGGAGAAGAGGT | (GA)14 | 250 | (GA)6 GAAAGG (GA)7 | 250–260 |
R | CCAACAGCCCTTCTTTTTGA | ||||||
Afco_22 | JX422049.1 | F | GAAGAAGCGTTGGTGAGAGG | (TC)20 | 468 | (TC)9 | 449–455 |
R | CTGTGTCGTCCAGCCGTATT |