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Table 2 Genomic regions identified with regional heritability mapping (100-SNP windows) affecting three bovine tuberculosis traits. Phenotype 1, positive reactors to the skin test with positive post-mortem results; phenotype 2, positive reactors to the skin test regardless of post-mortem results; phenotype 3, as phenotype 2 plus non-reactors and inconclusive reactors with positive post-mortem examination results

From: Genomic regions underlying susceptibility to bovine tuberculosis in Holstein-Friesian cattle

Phenotype BTA Genomic regions (SNP name and position (bp)) LRT h2 r(SE)
Start End
1 18 Hapmap57004-rs29011610 ARS-BFGL-NGS-1116 9.41b 0.06(0.03)
  4463083 9539002   
2 23 ARS-BFGL-NGS-78313
30222836
BTA-56563-no-rs
38412668
15.12a 0.05(0.03)
23 ARS-BFGL-NGS-107881
33961556
BTB-00870908
41672507
20.41a 0.07(0.03)
23 Hapmap31420-BTA-137383
38521106
ARS-BFGL-NGS-41732
44897933
9.27b 0.05(0.03)
3 ARS-BFGL-84593
114388249
ARS-BFGL-NGS-26427
119113936
9.48b 0.07(0.03)
3 23 ARS-BFGL-NGS-78313
30222836
BTA-56563-no-rs
38412668
15.98a 0.05(0.03)
23 ARS-BFGL-NGS-107881
33961556
BTB-00870908
41672507
21.37a 0.08(0.03)
23 Hapmap31420-BTA-137383
38521106
ARS-BFGL-NGS-41732
44897933
9.76b 0.05(0.03)
3 ARS-BFGL-84593
114388249
ARS-BFGL-NGS-26427
119113936
10.37b 0.08(0.04)
  1. h 2 r regional heritability, SE standard error
  2. aGenome-wide significance level; bSuggestive significance level