|
Haplotype based on
|
---|
Q-Tag SNP1
|
2 Q-Tag SNP
|
3 Q-Tag SNP
|
4 Q-Tag SNP
|
5 Q-Tag SNP
|
---|
σ2
a
|
0.113
|
0.082
|
0.084
|
0.084
|
0.084
|
σ2
haplo-group
|
1.022
|
0.664
|
0.685
|
0.685
|
0.685
|
σ2
e
|
0.288
|
0.297
|
0.293
|
0.293
|
0.293
|
h2
haplo-group
|
0.718
|
0.637
|
0.645
|
0.645
|
0.645
|
|
Estimated effectb
|
haplo-group A1
a
|
0.71 (58%)
|
0.78 (51%)
|
0.79 (44%)
|
0.79 (44%)
|
0.79 (44%)
|
haplo-group A2
| |
0.62 (7%)
|
0.62 (14%)
|
0.62 (14%)
|
0.62 (14%)
|
haplo-group B2
| |
−0.57 (24%)
|
−0.58 (24%)
|
−0.58 (24%)
|
−0.58 (24%)
|
haplo-group B1
|
−0.71 (42%)
|
−0.83 (18%)
|
−0.84 (18%)
|
−0.84 (18%)
|
−0.84 (18%)
|
Difference A1A1-B1B1
|
2.86
|
3.22
|
3.26
|
3.26
|
3.26
|
-
aHaplotypes are assigned to one of the 4 haplo-groups as described in Fig. 2
-
bEffect of one copy of the haplotype with frequency in the population in parentheses