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Table 7 Results of analysis of variance of the DGV validation accuracies for the SCE2 scenariosa,b,c

From: Genomic predictions for economically important traits in Brazilian Braford and Hereford beef cattle using true and imputed genotypes

Trait

Paneld

Scenarioe

8–15

8–50

15–50

10–60

20–60

30–60

40–60

50–60

WGBW

ns

ns

ns

ns

ns

ns

ns

ns

WGWY

ns

* (50)

* (50)

ns

ns

ns

ns

ns

CW

* (8)

ns

* (50)

ns

ns

ns

ns

ns

CY

ns

ns

* (50)

ns

ns

ns

ns

ns

PW

ns

* (50)

* (50)

ns

ns

ns

ns

ns

PY

ns

* (50)

* (50)

ns

ns

ns

ns

ns

MW

ns

ns

* (50)

ns

ns

ns

ns

ns

MY

* (8)

ns

* (50)

ns

ns

ns

ns

ns

SCaf

ns

* (8)

* (15)

ns

ns

ns

ns

ns

SCawf

* (15)

* (50)

ns

ns

ns

ns

ns

ns

BW

ns

ns

ns

ns

ns

ns

ns

ns

BA

* (15)

ns

* (15)

ns

ns

ns

ns

ns

SW

* (8)

* (8)

ns

ns

ns

ns

ns

ns

SY

ns

ns

ns

ns

ns

ns

ns

ns

NW

* (15)

ns

ns

ns

ns

ns

ns

ns

NY

* (15)

* (50)

ns

ns

ns

ns

ns

ns

HW

* (15)

* (50)

* (50)

ns

ns

ns

ns

ns

HY

ns

ns

ns

ns

ns

ns

ns

ns

TR

* (8)

* (8)

* (50)

ns

ns

ns

ns

ns

OP

ns

ns

* (50)

ns

ns

ns

ns

ns

  1. a DGV validation accuracy means Pearson’s correlation between DGVs and EBVs in the validation population; b SCE2 scenario that the percentage of animals with imputed genotypes in the training population varied; c “*” means that there was a significant difference (P < 0.05). The value between brackets indicates which panel/scenario had higher estimated accuracy. “ns” means that there was no significant difference (P > 0.05); d 8,15 and 50 means the 8 K, 15 K and 50 K SNP panel. 8–15, 8–50 and 15–50 are the contrasts between the two panels; e 10, 20, 30, 40, 50 and 60 means the percentage of imputed genotypes. 10–60, 20–60, 30–60, 40–60, 50–60 is the contrast between the two percentages of the imputed genotypes; f SCa is the scrotal circumference adjusted for age at yearling and SCaw is the scrotal circumference adjusted for age and weight at yearling