Table 1 Most significant genetic markers associated with Sire Conception Rate (SCR)
From: Unravelling the genomic architecture of bull fertility in Holstein cattle
Marker | Chr | Position | Frequency | β ± se | P-value | q-value | Nearest gene |
|---|---|---|---|---|---|---|---|
BTB-01438088 | 9 | 11867269 | 0.038 | −0.65 ± 0.12 | 5.1 × 10− 8 | 0.001 | RIMS1 (within) |
BTB-01138539 | 15 | 26472899 | 0.815 | 0.26 ± 0.06 | 7.0 × 10− 6 | 0.102 | CADM1 (22 kb) |
ARS-BFGL-NGS-106232 | 21 | 71210609 | 0.670 | 0.20 ± 0.05 | 1.4 × 10− 5 | 0.136 | BRF1 (within) |
BTA-59768-no-rs | 25 | 27477941 | 0.266 | −0.29 ± 0.06 | 2.7 × 10− 7 | 0.005 | KAT8 (within) |
ARS-BFGL-NGS-112660 | 25 | 27672891 | 0.266 | −0.29 ± 0.06 | 2.8 × 10− 7 | 0.005 | ITGAM (34 kb) |
Hapmap8541-BTA-59825 | 25 | 28711626 | 0.150 | −0.30 ± 0.07 | 1.4 × 10− 5 | 0.136 | TYW1 (within) |