TY - JOUR AU - Williams, A. L. AU - Jacobs, S. B. AU - Moreno-Macías, H. AU - Huerta-Chagoya, A. AU - Churchhouse, C. PY - 2014 DA - 2014// TI - Sequence variants in SLC16A11 are a common risk factor for type 2 diabetes in Mexico JO - Nature VL - 506 ID - Williams2014 ER - TY - JOUR AU - Grant, S. F. AU - Thorleifsson, G. AU - Reynisdottir, I. AU - Benediktsson, R. AU - Manolescu, A. AU - Sainz, J. PY - 2006 DA - 2006// TI - Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetes JO - Nat Genet VL - 38 UR - https://doi.org/10.1038/ng1732 DO - 10.1038/ng1732 ID - Grant2006 ER - TY - JOUR AU - Cauchi, S. AU - Meyre, D. AU - Choquet, H. AU - Dina, C. AU - Born, C. AU - Marre, M. PY - 2006 DA - 2006// TI - TCF7L2 variation predicts hyperglycemia incidence in a French general population: The data from an epidemiological study on the insulin resistance syndrome (DESIR) study JO - Diabetes VL - 55 UR - https://doi.org/10.2337/db06-0692 DO - 10.2337/db06-0692 ID - Cauchi2006 ER - TY - JOUR AU - Weedon, M. N. PY - 2007 DA - 2007// TI - The importance of TCF7L2 JO - Diabet Med VL - 24 UR - https://doi.org/10.1111/j.1464-5491.2007.02258.x DO - 10.1111/j.1464-5491.2007.02258.x ID - Weedon2007 ER - TY - JOUR AU - Cauchi, S. AU - Achhab, Y. AU - Choquet, H. AU - Dina, C. AU - Krempler, F. AU - Weitgasser, R. PY - 2007 DA - 2007// TI - TCF7L2 is reproducibly associated with type 2 diabetes in various ethnic groups: A global meta-analysis JO - J Mol Med (Berl) VL - 85 UR - https://doi.org/10.1007/s00109-007-0203-4 DO - 10.1007/s00109-007-0203-4 ID - Cauchi2007 ER - TY - JOUR AU - Palizban, A. AU - Nikpour, M. AU - Salehi, R. AU - Maracy, M. R. PY - 2012 DA - 2012// TI - Association of a common variant in TCF7L2 gene with type 2 diabetes mellitus in a Persian population JO - Clin Exp Med VL - 12 UR - https://doi.org/10.1007/s10238-011-0144-7 DO - 10.1007/s10238-011-0144-7 ID - Palizban2012 ER - TY - JOUR AU - Martínez-Gómez, L. E. AU - Cruz, M. AU - Martínez-Nava, G. A. AU - Madrid-Marina, V. AU - Parra, E. AU - García-Mena, J. PY - 2011 DA - 2011// TI - A replication study of the IRS1, CAPN10, TCF7L2, and PPARG gene polymorphisms associated with type 2 diabetes in two different populations of Mexico JO - Ann Hum Genet VL - 75 UR - https://doi.org/10.1111/j.1469-1809.2011.00668.x DO - 10.1111/j.1469-1809.2011.00668.x ID - Martínez-Gómez2011 ER - TY - JOUR AU - Amerongen, R. AU - Nawijn, M. C. AU - Lambooij, J. P. AU - Proost, N. AU - Jonkers, J. AU - Berns, A. PY - 2010 DA - 2010// TI - Frat oncoproteins act at the crossroad of canonical and noncanonical Wnt-signaling pathways JO - Oncogene VL - 29 UR - https://doi.org/10.1038/onc.2009.310 DO - 10.1038/onc.2009.310 ID - Amerongen2010 ER - TY - JOUR AU - Chang, Y. C. AU - Chang, T. J. AU - Jiang, Y. D. AU - Kuo, S. S. AU - Lee, K. C. AU - Chiu, K. C. PY - 2007 DA - 2007// TI - Association study of the genetic polymorphisms of the transcription factor 7-like 2 (TCF7L2) gene and type 2 diabetes in the Chinese population JO - Diabetes VL - 56 UR - https://doi.org/10.2337/db07-0421 DO - 10.2337/db07-0421 ID - Chang2007 ER - TY - JOUR AU - Ng, M. C. AU - Tam, C. H. AU - Lam, V. K. AU - So, W. Y. AU - Ma, R. C. AU - Chan, J. C. PY - 2007 DA - 2007// TI - Replication and identification of novel variants at TCF7L2 associated with type 2 diabetes in Hong Kong Chinese JO - J Clin Endocrinol Metab VL - 92 UR - https://doi.org/10.1210/jc.2007-0849 DO - 10.1210/jc.2007-0849 ID - Ng2007 ER - TY - JOUR AU - Lehman, D. M. AU - Hunt, K. J. AU - Leach, R. J. AU - Hamlington, J. AU - Arya, R. AU - Abboud, H. E. PY - 2007 DA - 2007// TI - Haplotypes of transcription factor 7-like 2 (TCF7L2) gene and its upstream region are associated with type 2 diabetes and age of onset in Mexican Americans JO - Diabetes VL - 56 UR - https://doi.org/10.2337/db06-0860 DO - 10.2337/db06-0860 ID - Lehman2007 ER - TY - JOUR AU - Helgason, A. AU - Pálsson, S. AU - Thorleifsson, G. AU - Grant, S. F. AU - Emilsson, V. AU - Gunnarsdottir, S. PY - 2007 DA - 2007// TI - Refining the impact of TCF7L2 gene variants on type 2 diabetes and adaptive evolution JO - Nat Genet VL - 39 UR - https://doi.org/10.1038/ng1960 DO - 10.1038/ng1960 ID - Helgason2007 ER - TY - JOUR AU - Ahlzén, M. AU - Johansson, L. E. AU - Cervin, C. AU - Tornqvist, H. AU - Groop, L. AU - Ridderstråle, M. PY - 2008 DA - 2008// TI - Expression of the transcription factor 7-like 2 gene (TCF7L2) in human adipocytes is down regulated by insulin JO - Biochem Biophys Res Commun VL - 370 UR - https://doi.org/10.1016/j.bbrc.2008.03.006 DO - 10.1016/j.bbrc.2008.03.006 ID - Ahlzén2008 ER - TY - JOUR AU - Osmark, P. AU - Hansson, O. AU - Jonsson, A. AU - Rönn, T. AU - Groop, L. AU - Renström, E. PY - 2009 DA - 2009// TI - Unique splicing pattern of the TCF7L2 gene in human pancreatic islets JO - Diabetologia VL - 52 UR - https://doi.org/10.1007/s00125-009-1293-z DO - 10.1007/s00125-009-1293-z ID - Osmark2009 ER - TY - JOUR AU - Humphries, S. E. AU - Gable, D. AU - Cooper, J. A. AU - Ireland, H. AU - Stephens, J. W. AU - Hurel, S. J. PY - 2006 DA - 2006// TI - Common variants in the TCF7L2 gene and predisposition to type 2 diabetes in UK European Whites, Indian Asians and Afro-Caribbean men and women JO - J Mol Med (Berl) VL - 84 UR - https://doi.org/10.1007/s00109-006-0108-7 DO - 10.1007/s00109-006-0108-7 ID - Humphries2006 ER - TY - JOUR AU - Miyake, K. AU - Horikawa, Y. AU - Hara, K. AU - Yasuda, K. AU - Osawa, H. AU - Furuta, H. PY - 2008 DA - 2008// TI - Association of TCF7L2 polymorphisms with susceptibility to type 2 diabetes in 4,087 Japanese subjects JO - J Hum Genet VL - 53 UR - https://doi.org/10.1007/s10038-007-0231-5 DO - 10.1007/s10038-007-0231-5 ID - Miyake2008 ER - TY - JOUR AU - Reyes-Lopez, R. AU - Perez-Luque, E. AU - Malacara, J. M. PY - 2014 DA - 2014// TI - Metabolic hormonal characteristics and genetic variants of TCF7L2 associated with development of gestational diabetes mellitus in Mexican women JO - Diabetes Metab Res Rev VL - 8 UR - https://doi.org/10.1002/dmrr.2538 DO - 10.1002/dmrr.2538 ID - Reyes-Lopez2014 ER - TY - JOUR AU - McClellan, J. AU - King, M. C. PY - 2010 DA - 2010// TI - Genetic heterogeneity in human disease JO - Cell VL - 141 UR - https://doi.org/10.1016/j.cell.2010.03.032 DO - 10.1016/j.cell.2010.03.032 ID - McClellan2010 ER - TY - JOUR AU - Coventry, A. AU - Bull-Otterson, L. M. AU - Liu, X. AU - Clark, A. G. AU - Maxwell, T. J. AU - Crosby, J. PY - 2010 DA - 2010// TI - Deep resequencing reveals excess rare recent variants consistent with explosive population growth JO - Nat Comm VL - 1 UR - https://doi.org/10.1038/ncomms1130 DO - 10.1038/ncomms1130 ID - Coventry2010 ER - TY - JOUR AU - Tennessen, J. A. AU - Bigham, A. W. AU - O’Connor, T. D. AU - Fu, W. AU - Kenny, E. E. AU - Gravel, S. PY - 2012 DA - 2012// TI - Evolution and functional impact of rare coding variation from deep sequencing of human exomes JO - Science VL - 337 UR - https://doi.org/10.1126/science.1219240 DO - 10.1126/science.1219240 ID - Tennessen2012 ER - TY - JOUR AU - Kim, Y. AU - Nielsen, R. PY - 2004 DA - 2004// TI - Linkage disequilibrium as a signature of selective sweeps JO - Genet VL - 167 UR - https://doi.org/10.1534/genetics.103.025387 DO - 10.1534/genetics.103.025387 ID - Kim2004 ER - TY - JOUR AU - Sabeti, P. C. AU - Reich, D. E. AU - Higgins, J. M. AU - Levine, H. Z. AU - Richter, D. J. AU - Schaffner, S. F. AU - Gabriel, S. B. AU - Platko, J. V. AU - Patterson, N. J. AU - McDonald, G. J. PY - 2002 DA - 2002// TI - Detecting recent positive selection in the human genome from haplotype structure JO - Nature VL - 419 UR - https://doi.org/10.1038/nature01140 DO - 10.1038/nature01140 ID - Sabeti2002 ER - TY - JOUR AU - VanLiere, J. M. AU - Rosenberg, N. A. PY - 2008 DA - 2008// TI - Mathematical properties of the r2 measure of linkage disequilibrium JO - Theor Popul Biol VL - 74 UR - https://doi.org/10.1016/j.tpb.2008.05.006 DO - 10.1016/j.tpb.2008.05.006 ID - VanLiere2008 ER - TY - JOUR AU - Mahajan, A. PY - 2014 DA - 2014// TI - Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility JO - Nat Genet VL - 46 UR - https://doi.org/10.1038/ng.2897 DO - 10.1038/ng.2897 ID - Mahajan2014 ER - TY - JOUR AU - Kaminsky, E. B. AU - Kaul, V. AU - Paschall, J. AU - Church, D. M. AU - Bunke, B. AU - Kunig, D. PY - 2011 DA - 2011// TI - An evidence-based approach to establish the functional and clinical significance of copy number variants in intellectual and developmental disabilities JO - Genet Med VL - 13 UR - https://doi.org/10.1097/GIM.0b013e31822c79f9 DO - 10.1097/GIM.0b013e31822c79f9 ID - Kaminsky2011 ER - TY - JOUR AU - Ruiz-Narváez, E. A. PY - 2014 DA - 2014// TI - Redundant enhancers and causal variants in the TCF7L2 gene JO - Eur J Hum Genet VL - 22 UR - https://doi.org/10.1038/ejhg.2014.17 DO - 10.1038/ejhg.2014.17 ID - Ruiz-Narváez2014 ER - TY - JOUR AU - Hansson, O. AU - Zhou, Y. AU - Renström, E. AU - Osmark, P. PY - 2010 DA - 2010// TI - Molecular function of TCF7L2: Consequences of TCF7L2 splicing for molecular function and risk for type 2 diabetes JO - Current Diabetes Reports VL - 10 UR - https://doi.org/10.1007/s11892-010-0149-8 DO - 10.1007/s11892-010-0149-8 ID - Hansson2010 ER - TY - JOUR AU - Zhou, Y. AU - Park, S. Y. AU - Su, J. AU - Bailey, K. AU - Ottosson-Laakso, E. AU - Shcherbina, L. PY - 2014 DA - 2014// TI - TCF7L2 is a master regulator of insulin production and processing JO - Hum Mol Genet VL - 23 UR - https://doi.org/10.1093/hmg/ddu359 DO - 10.1093/hmg/ddu359 ID - Zhou2014 ER - TY - JOUR AU - Hara, K. AU - Fujita, H. AU - Johnson, T. A. AU - Yamauchi, T. AU - Yasuda, K. AU - Horikoshi, M. PY - 2014 DA - 2014// TI - Genome-wide association study identifies three novel loci for type 2 diabetes JO - Hum Mol Genet VL - 23 UR - https://doi.org/10.1093/hmg/ddt399 DO - 10.1093/hmg/ddt399 ID - Hara2014 ER - TY - JOUR AU - Saxena, R. AU - Saleheen, D. AU - Been, L. F. AU - Garavito, M. L. AU - Braun, T. AU - Bjonnes, A. PY - 2013 DA - 2013// TI - Genome-wide association study identifies a novel locus contributing to type 2 diabetes susceptibility in Sikhs of Punjabi origin from India JO - Diabetes VL - 62 UR - https://doi.org/10.2337/db12-1077 DO - 10.2337/db12-1077 ID - Saxena2013 ER - TY - JOUR AU - Turki, A. AU - Al-Zaben, G. S. AU - Mtiraoui, N. AU - Marmmuoch, H. AU - Mahjoub, T. AU - Almawi, W. Y. PY - 2013 DA - 2013// TI - Transcription factor-7-like 2 gene variants are strongly associated with type 2 diabetes in Tunisian Arab subjects JO - Gene VL - 513 UR - https://doi.org/10.1016/j.gene.2012.10.086 DO - 10.1016/j.gene.2012.10.086 ID - Turki2013 ER - TY - JOUR AU - Reich, D. E. AU - Cargill, M. AU - Bolk, S. AU - Ireland, J. AU - Sabeti, P. C. AU - Richter, D. J. PY - 2001 DA - 2001// TI - Linkage disequilibrium in the human genome JO - Nature VL - 411 UR - https://doi.org/10.1038/35075590 DO - 10.1038/35075590 ID - Reich2001 ER - TY - JOUR AU - Reich, D. E. AU - Lander, E. S. PY - 2001 DA - 2001// TI - On the allelic spectrum of human disease JO - Trends Genet VL - 17 UR - https://doi.org/10.1016/S0168-9525(01)02410-6 DO - 10.1016/S0168-9525(01)02410-6 ID - Reich2001 ER - TY - JOUR AU - Johnson, A. D. AU - Handsaker, R. E. AU - Pulit, S. L. AU - Nizzari, M. M. AU - O’Donnell, C. J. AU - Bakker, P. I. PY - 2008 DA - 2008// TI - Snap: A web-based tool for identification and annotation of proxy SNPs using HapMap JO - BioInformatics VL - 24 UR - https://doi.org/10.1093/bioinformatics/btn564 DO - 10.1093/bioinformatics/btn564 ID - Johnson2008 ER - TY - JOUR AU - Johnston, H. R. AU - Cutler, D. J. PY - 2012 DA - 2012// TI - Population demographic history can cause the appearance of recombination hotspots JO - Am J Hum Genet VL - 90 UR - https://doi.org/10.1016/j.ajhg.2012.03.011 DO - 10.1016/j.ajhg.2012.03.011 ID - Johnston2012 ER - TY - JOUR AU - Verrelli, B. C. AU - Tishkoff, S. A. PY - 2004 DA - 2004// TI - Signatures of selection and gene conversion associated with human color vision variation JO - Am J Hum Genet VL - 75 UR - https://doi.org/10.1086/423287 DO - 10.1086/423287 ID - Verrelli2004 ER - TY - JOUR AU - Reed, F. A. AU - Tishkoff, S. A. PY - 2006 DA - 2006// TI - Positive selection can create false hotspots of recombination JO - Genet VL - 172 UR - https://doi.org/10.1534/genetics.105.052183 DO - 10.1534/genetics.105.052183 ID - Reed2006 ER - TY - JOUR AU - Chen, H. AU - Patterson, N. AU - Reich, D. PY - 2010 DA - 2010// TI - Population differentiation as a test for selective sweeps JO - Genome Res VL - 20 UR - https://doi.org/10.1101/gr.100545.109 DO - 10.1101/gr.100545.109 ID - Chen2010 ER - TY - JOUR AU - Hindle, A. K. AU - Brody, F. AU - Teva, R. AU - Kluk, B. AU - Hill, S. AU - McCaffrey, T. PY - 2009 DA - 2009// TI - TCF7L2 expression in diabetic patients undergoing bariatric surgery JO - Surg Endosc VL - 23 UR - https://doi.org/10.1007/s00464-008-0001-2 DO - 10.1007/s00464-008-0001-2 ID - Hindle2009 ER - TY - JOUR AU - Yang, H. AU - Li, Q. AU - Lee, J. H. AU - Shu, Y. PY - 2012 DA - 2012// TI - Reduction in Tcf7l2 expression decreases diabetic susceptibility in mice JO - Int J Biol Sci VL - 8 UR - https://doi.org/10.7150/ijbs.4568 DO - 10.7150/ijbs.4568 ID - Yang2012 ER - TY - JOUR AU - Prokunina-Olsson, L. AU - Welch, C. AU - Hansson, O. AU - Adhikari, N. AU - Scott, L. J. AU - Usher, N. PY - 2009 DA - 2009// TI - Tissue-specific alternative splicing of TCF7L2 JO - Hum Mol Genet VL - 18 UR - https://doi.org/10.1093/hmg/ddp321 DO - 10.1093/hmg/ddp321 ID - Prokunina-Olsson2009 ER - TY - JOUR AU - Weise, A. AU - Bruser, K. AU - Elfert, S. AU - Wallmen, B. AU - Wittel, Y. AU - Wöhrle, S. PY - 2010 DA - 2010// TI - Alternative splicing of Tcf7l2 transcripts generates protein variants with differential promoter-binding and transcriptional activation properties at Wnt/beta-catenin targets JO - Nucleic Acids Res VL - 38 UR - https://doi.org/10.1093/nar/gkp1197 DO - 10.1093/nar/gkp1197 ID - Weise2010 ER - TY - JOUR AU - Mondal, A. K. AU - Das, S. K. AU - Baldini, G. AU - Chu, W. S. AU - Sharma, N. K. AU - Hackney, O. G. PY - 2010 DA - 2010// TI - Genotype and tissue-specific effects on alternative splicing of the transcription factor 7-like 2 gene in humans JO - J Clin Endocrinol Metab VL - 95 UR - https://doi.org/10.1210/jc.2009-2064 DO - 10.1210/jc.2009-2064 ID - Mondal2010 ER - TY - JOUR AU - Bacquer, O. AU - Shu, L. AU - Marchand, M. AU - Neve, B. AU - Paroni, F. AU - Kerr Conte, J. PY - 2011 DA - 2011// TI - TCF7L2 splice variants have distinct effects on beta-cell turnover and function JO - Hum Mol Genet VL - 20 UR - https://doi.org/10.1093/hmg/ddr072 DO - 10.1093/hmg/ddr072 ID - Bacquer2011 ER - TY - JOUR AU - Silva-Zolezzi, I. AU - Hidalgo-Miranda, A. AU - Estrada-Gil, J. AU - Fernandez-Lopez, J. C. AU - Uribe-Figueroa, L. AU - Contreras, A. PY - 2009 DA - 2009// TI - Analysis of genomic diversity in Mexican mestizo populations to develop genomic medicine in Mexico JO - Proc Natl Acad Sci U S A VL - 106 UR - https://doi.org/10.1073/pnas.0903045106 DO - 10.1073/pnas.0903045106 ID - Silva-Zolezzi2009 ER - TY - BOOK AU - Andrews, S. PY - 2010 DA - 2010// TI - A quality control tool for high throughput sequence data ID - Andrews2010 ER - TY - JOUR AU - Stephens, M. AU - Sloan, J. S. AU - Robertson, P. D. AU - Scheet, P. AU - Nickerson, D. A. PY - 2006 DA - 2006// TI - Automating sequence-based detection and genotyping of SNPs from diploid samples JO - Nat Genet VL - 38 UR - https://doi.org/10.1038/ng1746 DO - 10.1038/ng1746 ID - Stephens2006 ER - TY - BOOK AU - Nilsson, D. PY - 2011 DA - 2011// TI - A simple pipeline for Sanger read heterozygosity aware mutation screening ID - Nilsson2011 ER - TY - JOUR AU - Sherry, S. T. AU - Ward, M. H. AU - Kholodov, M. AU - Baker, J. AU - Phan, L. AU - Smigielski, E. M. PY - 2001 DA - 2001// TI - DbSNP: The NCBI database of genetic variation JO - Nucleic Acids Res VL - 29 UR - https://doi.org/10.1093/nar/29.1.308 DO - 10.1093/nar/29.1.308 ID - Sherry2001 ER - TY - JOUR AU - Purcell, S. AU - Neale, B. AU - Todd-Brown, K. AU - Thomas, L. AU - Ferreira, M. A. AU - Bender, D. PY - 2007 DA - 2007// TI - Plink: A tool set for whole-genome association and population-based linkage analyses JO - Am J Hum Genet VL - 81 UR - https://doi.org/10.1086/519795 DO - 10.1086/519795 ID - Purcell2007 ER - TY - JOUR AU - Voight, B. F. AU - Kudaravalli, S. AU - Wen, X. AU - Pritchard, J. K. PY - 2006 DA - 2006// TI - A map of recent positive selection in the human genome JO - PLoS Biol VL - 4 UR - https://doi.org/10.1371/journal.pbio.0040072 DO - 10.1371/journal.pbio.0040072 ID - Voight2006 ER - TY - JOUR AU - Ferrer-Admetlla, A. AU - Liang, M. AU - Korneliussen, T. AU - Nielsen, R. PY - 2014 DA - 2014// TI - On detecting incomplete soft or hard selective sweeps using haplotype structure JO - Mol Biol Evol VL - 31 UR - https://doi.org/10.1093/molbev/msu077 DO - 10.1093/molbev/msu077 ID - Ferrer-Admetlla2014 ER - TY - JOUR AU - Szpiech, Z. A. AU - Hernandez, R. D. PY - 2014 DA - 2014// TI - selscan: an efficient multithreaded program to perform EHH-based scans for positive selection JO - Mol Biol Evol VL - 31 UR - https://doi.org/10.1093/molbev/msu211 DO - 10.1093/molbev/msu211 ID - Szpiech2014 ER - TY - JOUR AU - Altshuler, D. M. AU - Gibbs, R. A. AU - Peltonen, L. AU - Dermitzakis, E. AU - Schaffner, S. F. AU - Yu, F. AU - Bonnen, P. E. AU - Bakker, P. I. AU - Deloukas, P. AU - Gabriel, S. B. PY - 2010 DA - 2010// TI - Integrating common and rare genetic variation in diverse human populations JO - Nature VL - 467 UR - https://doi.org/10.1038/nature09298 DO - 10.1038/nature09298 ID - Altshuler2010 ER - TY - JOUR AU - Fariello, M. I. AU - Boitard, S. AU - Naya, H. AU - SanCristobal, M. AU - Servin, B. PY - 2013 DA - 2013// TI - Detecting signatures of selection through haplotype differentiation among hierarchically structured populations JO - Genetics VL - 193 UR - https://doi.org/10.1534/genetics.112.147231 DO - 10.1534/genetics.112.147231 ID - Fariello2013 ER - TY - BOOK AU - MathWorks, I. PY - 2012 DA - 2012// TI - MATLAB and Statistics Toolbox Release 2012 PB - The MathWorks, Inc CY - Natick ID - MathWorks2012 ER - TY - JOUR AU - Alachiotis, N. AU - Stamatakis, A. AU - Pavlidis, P. PY - 2012 DA - 2012// TI - OmegaPlus: A scalable tool for rapid detection of selective sweeps in whole-genome datasets JO - BioInformatics VL - 28 UR - https://doi.org/10.1093/bioinformatics/bts419 DO - 10.1093/bioinformatics/bts419 ID - Alachiotis2012 ER - TY - JOUR AU - Pruim, R. J. AU - Welch, R. P. AU - Sanna, S. AU - Teslovich, T. M. AU - Chines, P. S. AU - Gliedt, T. P. PY - 2010 DA - 2010// TI - LocusZoom: Regional visualization of genome-wide association scan results JO - BioInformatics VL - 26 UR - https://doi.org/10.1093/bioinformatics/btq419 DO - 10.1093/bioinformatics/btq419 ID - Pruim2010 ER - TY - JOUR AU - Polzin, T. AU - Daneshmand, S. V. PY - 2003 DA - 2003// TI - On Steiner trees and minimum spanning trees in hypergraphs JO - Oper Res Lett VL - 31 UR - https://doi.org/10.1016/S0167-6377(02)00185-2 DO - 10.1016/S0167-6377(02)00185-2 ID - Polzin2003 ER - TY - JOUR AU - Huson, D. H. AU - Bryant, D. PY - 2006 DA - 2006// TI - Application of phylogenetic networks in evolutionary studies JO - Mol Biol Evol VL - 23 UR - https://doi.org/10.1093/molbev/msj030 DO - 10.1093/molbev/msj030 ID - Huson2006 ER - TY - JOUR AU - Wang, K. AU - Li, M. AU - Hakonarson, H. PY - 2010 DA - 2010// TI - ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data JO - Nucleic Acids Res VL - 38 UR - https://doi.org/10.1093/nar/gkq603 DO - 10.1093/nar/gkq603 ID - Wang2010 ER - TY - JOUR AU - Cingolani, P. AU - Platts, A. AU - Wang, L. AU - Coon, M. AU - Nguyen, T. AU - Wang, L. PY - 2012 DA - 2012// TI - A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3 JO - Fly VL - 6 UR - https://doi.org/10.4161/fly.19695 DO - 10.4161/fly.19695 ID - Cingolani2012 ER - TY - JOUR AU - Bruno, A. E. AU - Li, L. AU - Kalabus, J. L. AU - Pan, Y. AU - Yu, A. AU - Hu, Z. PY - 2012 DA - 2012// TI - miRdSNP: A database of disease-associated SNPs and microRNA target sites on 3’UTRs of human genes JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-44 DO - 10.1186/1471-2164-13-44 ID - Bruno2012 ER - TY - JOUR AU - Maragkakis, M. AU - Reczko, M. AU - Simossis, V. A. AU - Alexiou, P. AU - Papadopoulos, G. L. AU - Dalamagas, T. PY - 2009 DA - 2009// TI - DIANA-microT web server: Elucidating microRNA functions through target prediction JO - Nucleic Acids Res VL - 37 UR - https://doi.org/10.1093/nar/gkp292 DO - 10.1093/nar/gkp292 ID - Maragkakis2009 ER - TY - JOUR AU - Sabarinathan, R. AU - Tafer, H. AU - Seemann, S. E. AU - Hofacker, I. L. AU - Stadler, P. F. AU - Gorodkin, J. PY - 2013 DA - 2013// TI - The RNAsnp web server: Predicting SNP effects on local RNA secondary structure JO - Nucleic Acids Res VL - 41 UR - https://doi.org/10.1093/nar/gkt291 DO - 10.1093/nar/gkt291 ID - Sabarinathan2013 ER -