TY - JOUR AU - Ellegren, H. AU - Smeds, L. AU - Burri, R. AU - Olason, P. I. AU - Backstrom, N. AU - Kawakami, T. AU - Kunstner, A. AU - Makinen, H. AU - Nadachowska-Brzyska, K. AU - Qvarnstrom, A. PY - 2012 DA - 2012// TI - The genomic landscape of species divergence in Ficedula flycatchers JO - Nature VL - 491 ID - Ellegren2012 ER - TY - JOUR AU - Oneal, E. AU - Knowles, L. L. PY - 2013 DA - 2013// TI - Ecological selection as the cause and sexual differentiation as the consequence of species divergence? JO - Proc R Soc Lond B Biol Sci VL - 280 ID - Oneal2013 ER - TY - JOUR AU - Matsubara, K. AU - Yamamoto, E. AU - Mizobuchi, R. AU - Yonemaru, J. AU - Yamamoto, T. AU - Kato, H. AU - Yano, M. PY - 2015 DA - 2015// TI - Hybrid breakdown caused by epistasis-based recessive incompatibility in a cross of rice (Oryza sativa L.) JO - J Hered VL - 106 UR - https://doi.org/10.1093/jhered/esu065 DO - 10.1093/jhered/esu065 ID - Matsubara2015 ER - TY - JOUR AU - Burton, R. S. AU - Pereira, R. J. AU - Barreto, F. S. PY - 2013 DA - 2013// TI - Cytonuclear genomic interactions and hybrid breakdown JO - Annu Rev Ecol Evol Syst VL - 44 UR - https://doi.org/10.1146/annurev-ecolsys-110512-135758 DO - 10.1146/annurev-ecolsys-110512-135758 ID - Burton2013 ER - TY - JOUR AU - Yamamoto, E. AU - Takashi, T. AU - Morinaka, Y. AU - Lin, S. AU - Wu, J. AU - Matsumoto, T. AU - Kitano, H. AU - Matsuoka, M. AU - Ashikari, M. PY - 2010 DA - 2010// TI - Gain of deleterious function causes an autoimmune response and Bateson-Dobzhansky-Muller incompatibility in rice JO - Mol Genet Genomics VL - 283 UR - https://doi.org/10.1007/s00438-010-0514-y DO - 10.1007/s00438-010-0514-y ID - Yamamoto2010 ER - TY - JOUR AU - Yamamoto, E. AU - Takashi, T. AU - Morinaka, Y. AU - Lin, S. AU - Kitano, H. AU - Matsuoka, M. AU - Ashikari, M. PY - 2007 DA - 2007// TI - Interaction of two recessive genes, hbd2 and hbd3, induces hybrid breakdown in rice JO - Theor Appl Genet VL - 115 UR - https://doi.org/10.1007/s00122-007-0554-9 DO - 10.1007/s00122-007-0554-9 ID - Yamamoto2007 ER - TY - JOUR AU - Gibson, J. D. AU - Niehuis, O. AU - Peirson, B. R. AU - Cash, E. I. AU - Gadau, J. PY - 2013 DA - 2013// TI - Genetic and developmental basis of F2 hybrid breakdown in Nasonia parasitoid wasps JO - Evolution VL - 67 UR - https://doi.org/10.1111/evo.12080 DO - 10.1111/evo.12080 ID - Gibson2013 ER - TY - JOUR AU - Savolainen, O. AU - Hedrick, P. PY - 1995 DA - 1995// TI - Heterozygosity and fitness: no association in Scots pine JO - Genetics VL - 140 ID - Savolainen1995 ER - TY - JOUR AU - Vranckx, G. AU - Jacquemyn, H. AU - Mergeay, J. AU - Cox, K. AU - Janssens, P. AU - Gielen, B. A. S. AU - Muys, B. AU - Honnay, O. PY - 2014 DA - 2014// TI - The effect of drought stress on heterozygosity-fitness correlations in pedunculate oak (Quercus robur) JO - Ann Bot VL - 113 UR - https://doi.org/10.1093/aob/mcu025 DO - 10.1093/aob/mcu025 ID - Vranckx2014 ER - TY - JOUR AU - Abrahamsson, S. AU - Ahlinder, J. AU - Waldmann, P. AU - Garcia-Gil, M. R. PY - 2013 DA - 2013// TI - Maternal heterozygosity and progeny fitness association in an inbred Scots pine population JO - Genetica VL - 141 UR - https://doi.org/10.1007/s10709-013-9704-y DO - 10.1007/s10709-013-9704-y ID - Abrahamsson2013 ER - TY - JOUR AU - Olano-Marin, J. AU - Mueller, J. C. AU - Kempenaers, B. PY - 2011 DA - 2011// TI - Heterozygosity and survival in blue tits (Cyanistes caeruleus): contrasting effects of presumably functional and neutral loci JO - Mol Ecol VL - 20 UR - https://doi.org/10.1111/j.1365-294X.2011.05177.x DO - 10.1111/j.1365-294X.2011.05177.x ID - Olano-Marin2011 ER - TY - JOUR AU - Harrison, X. A. AU - Bearhop, S. AU - Inger, R. AU - Colhoun, K. AU - Gudmundsson, G. A. AU - Hodgson, D. AU - McElwaine, G. AU - Tregenza, T. PY - 2011 DA - 2011// TI - Heterozygosity-fitness correlations in a migratory bird: an analysis of inbreeding and single-locus effects JO - Mol Ecol VL - 20 UR - https://doi.org/10.1111/j.1365-294X.2011.05283.x DO - 10.1111/j.1365-294X.2011.05283.x ID - Harrison2011 ER - TY - JOUR AU - Ouyang, Y. AU - Zhang, Q. PY - 2013 DA - 2013// TI - Understanding reproductive isolation based on the rice model JO - Annu Rev Plant Biol VL - 64 UR - https://doi.org/10.1146/annurev-arplant-050312-120205 DO - 10.1146/annurev-arplant-050312-120205 ID - Ouyang2013 ER - TY - JOUR AU - Edmands, S. AU - Northrup, S. L. AU - Hwang, A. S. PY - 2009 DA - 2009// TI - Maladapted gene complexes within populations of the intertidal copepod Tigriopus californicus JO - Evolution VL - 63 UR - https://doi.org/10.1111/j.1558-5646.2009.00689.x DO - 10.1111/j.1558-5646.2009.00689.x ID - Edmands2009 ER - TY - STD TI - Kubo T, Yoshimura A. Epistasis underlying female sterility detected in hybrid breakdown in a Japonica-Indica cross of rice (Oryza sativa L.). Theor Appl Genet. 2005;110(2):346–55. ID - ref15 ER - TY - JOUR AU - Bikard, D. AU - Patel, D. AU - Mette, C. AU - Giorgi, V. AU - Camilleri, C. AU - Bennett, M. J. AU - Loudet, O. PY - 2009 DA - 2009// TI - Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana JO - Science VL - 323 UR - https://doi.org/10.1126/science.1165917 DO - 10.1126/science.1165917 ID - Bikard2009 ER - TY - JOUR AU - Ellison, C. K. AU - Burton, R. S. PY - 2008 DA - 2008// TI - Interpopulation hybrid breakdown maps to the mitochondrial genome JO - Evolution VL - 62 UR - https://doi.org/10.1111/j.1558-5646.2007.00305.x DO - 10.1111/j.1558-5646.2007.00305.x ID - Ellison2008 ER - TY - JOUR AU - Clarke, G. M. PY - 1993 DA - 1993// TI - The genetic basis of developmental stability. I. Relationships between stability, heterozygosity and genomic coadaptation JO - Genetica VL - 89 UR - https://doi.org/10.1007/BF02424502 DO - 10.1007/BF02424502 ID - Clarke1993 ER - TY - JOUR AU - Dobzhansky, T. AU - Pavlovsky, O. PY - 1958 DA - 1958// TI - Interracial hybridization and breakdown of coadapted gene complexes in Drosophila paulistorum and Drosophila willistoni JO - Proc Natl Acad Sci U S A VL - 44 UR - https://doi.org/10.1073/pnas.44.6.622 DO - 10.1073/pnas.44.6.622 ID - Dobzhansky1958 ER - TY - JOUR AU - Wetzel, D. P. AU - Stewart, I. R. AU - Westneat, D. F. PY - 2012 DA - 2012// TI - Heterozygosity predicts clutch and egg size but not plasticity in a house sparrow population with no evidence of inbreeding JO - Mol Ecol VL - 21 UR - https://doi.org/10.1111/j.1365-294X.2011.05380.x DO - 10.1111/j.1365-294X.2011.05380.x ID - Wetzel2012 ER - TY - JOUR AU - Hamilton, J. A. AU - Lexer, C. AU - Aitken, S. N. PY - 2013 DA - 2013// TI - Genomic and phenotypic architecture of a spruce hybrid zone (Picea sitchensis P. glauca) JO - Mol Ecol VL - 22 UR - https://doi.org/10.1111/mec.12007 DO - 10.1111/mec.12007 ID - Hamilton2013 ER - TY - JOUR AU - Aparicio, J. M. AU - Ortego, J. AU - Cordero, P. J. PY - 2006 DA - 2006// TI - What should we weigh to estimate heterozygosity, alleles or loci? JO - Mol Ecol VL - 15 UR - https://doi.org/10.1111/j.1365-294X.2006.03111.x DO - 10.1111/j.1365-294X.2006.03111.x ID - Aparicio2006 ER - TY - JOUR AU - Balloux, F. AU - Amos, W. AU - Coulson, T. PY - 2004 DA - 2004// TI - Does heterozygosity estimate inbreeding in real populations? JO - Mol Ecol VL - 13 UR - https://doi.org/10.1111/j.1365-294X.2004.02318.x DO - 10.1111/j.1365-294X.2004.02318.x ID - Balloux2004 ER - TY - JOUR AU - Szulkin, M. AU - Bierne, N. AU - David, P. PY - 2010 DA - 2010// TI - Heterozygosity-fitness correlations: a time for reappraisal JO - Evolution VL - 64 ID - Szulkin2010 ER - TY - JOUR AU - Jose Ruiz-Lopez, M. AU - Ganan, N. AU - Antonio Godoy, J. AU - Olmo, A. AU - Garde, J. AU - Espeso, G. AU - Vargas, A. AU - Martinez, F. AU - Roldan, E. R. S. AU - Gomendio, M. PY - 2012 DA - 2012// TI - Heterozygosity-Fitness correlations and inbreeding depression in two critically endangered mammals JO - Conserv Biol VL - 26 UR - https://doi.org/10.1111/j.1523-1739.2012.01916.x DO - 10.1111/j.1523-1739.2012.01916.x ID - Jose Ruiz-Lopez2012 ER - TY - JOUR AU - Voegeli, B. AU - Saladin, V. AU - Wegmann, M. AU - Richner, H. PY - 2012 DA - 2012// TI - Parasites as mediators of heterozygosity-fitness correlations in the Great Tit (Parus major) JO - J Evol Biol VL - 25 UR - https://doi.org/10.1111/j.1420-9101.2011.02445.x DO - 10.1111/j.1420-9101.2011.02445.x ID - Voegeli2012 ER - TY - JOUR AU - Miller, J. M. AU - Malenfant, R. M. AU - David, P. AU - Davis, C. S. AU - Poissant, J. AU - Hogg, J. T. AU - Festa-Bianchet, M. AU - Coltman, D. W. PY - 2014 DA - 2014// TI - Estimating genome-wide heterozygosity: effects of demographic history and marker type JO - Heredity VL - 112 UR - https://doi.org/10.1038/hdy.2013.99 DO - 10.1038/hdy.2013.99 ID - Miller2014 ER - TY - JOUR AU - Fitzpatrick, B. M. PY - 2012 DA - 2012// TI - Estimating ancestry and heterozygosity of hybrids using molecular markers JO - BMC Evol Biol VL - 12 UR - https://doi.org/10.1186/1471-2148-12-131 DO - 10.1186/1471-2148-12-131 ID - Fitzpatrick2012 ER - TY - JOUR AU - Chapman, J. R. AU - Nakagawa, S. AU - Coltman, D. W. AU - Slate, J. AU - Sheldon, B. C. PY - 2009 DA - 2009// TI - A quantitative review of heterozygosity-fitness correlations in animal populations JO - Mol Ecol VL - 18 UR - https://doi.org/10.1111/j.1365-294X.2009.04247.x DO - 10.1111/j.1365-294X.2009.04247.x ID - Chapman2009 ER - TY - BOOK AU - Paterson, A. H. PY - 2009 DA - 2009// TI - Genetics and genomics of cotton PB - Springer-Verlag CY - New York UR - https://doi.org/10.1007/978-0-387-70810-2 DO - 10.1007/978-0-387-70810-2 ID - Paterson2009 ER - TY - JOUR AU - Zhang, J. AU - Percy, R. G. AU - McCarty, J. C. PY - 2014 DA - 2014// TI - Introgression genetics and breeding between Upland and Pima cotton: a review JO - Euphytica VL - 198 UR - https://doi.org/10.1007/s10681-014-1094-4 DO - 10.1007/s10681-014-1094-4 ID - Zhang2014 ER - TY - JOUR AU - Kohel, R. AU - Endrizzi, J. AU - White, T. PY - 1977 DA - 1977// TI - An evaluation of Gossypium barbadense L. chromosomes 6 and 17 in the G. hirsutum L. genome JO - Crop Sci VL - 17 UR - https://doi.org/10.2135/cropsci1977.0011183X001700030016x DO - 10.2135/cropsci1977.0011183X001700030016x ID - Kohel1977 ER - TY - JOUR AU - Stephens, S. PY - 1949 DA - 1949// TI - The cytogenetics of speciation in Gossypium. I. Selective elimination of the donor parent genotype in interspecific backcrosses JO - Genetics VL - 34 ID - Stephens1949 ER - TY - JOUR AU - Kohel, R. J. PY - 1973 DA - 1973// TI - Genetic nomenclature in cotton JO - J Hered VL - 64 ID - Kohel1973 ER - TY - JOUR AU - Paterson, A. H. AU - Brubaker, C. L. AU - Wendel, J. F. PY - 1993 DA - 1993// TI - A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis JO - Plant Mol Biol Rep VL - 11 UR - https://doi.org/10.1007/BF02670470 DO - 10.1007/BF02670470 ID - Paterson1993 ER - TY - JOUR AU - Yu, Y. AU - Yuan, D. J. AU - Liang, S. G. AU - Li, X. M. AU - Wang, X. Q. AU - Lin, Z. X. AU - Zhang, X. L. PY - 2011 DA - 2011// TI - Genome structure of cotton revealed by a genome-wide SSR genetic map constructed from a BC1 population between Gossypium hirsutum and G. barbadense JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-15 DO - 10.1186/1471-2164-12-15 ID - Yu2011 ER - TY - JOUR AU - Yu, J. AU - Jung, S. AU - Cheng, C. H. AU - Ficklin, S. P. AU - Lee, T. AU - Zheng, P. AU - Jones, D. AU - Percy, R. G. AU - Main, D. PY - 2014 DA - 2014// TI - CottonGen: a genomics, genetics and breeding database for cotton research JO - Nucleic Acids Res VL - 42 UR - https://doi.org/10.1093/nar/gkt1064 DO - 10.1093/nar/gkt1064 ID - Yu2014 ER - TY - JOUR AU - Lin, Z. X. AU - He, D. AU - Zhang, X. L. AU - Nie, Y. AU - Guo, X. AU - Feng, C. AU - Stewart, J. M. PY - 2005 DA - 2005// TI - Linkage map construction and mapping QTL for cotton fibre quality using SRAP, SSR and RAPD JO - Plant Breed VL - 124 UR - https://doi.org/10.1111/j.1439-0523.2004.01039.x DO - 10.1111/j.1439-0523.2004.01039.x ID - Lin2005 ER - TY - JOUR AU - Bradbury, P. J. AU - Zhang, Z. AU - Kroon, D. E. AU - Casstevens, T. M. AU - Ramdoss, Y. AU - Buckler, E. S. PY - 2007 DA - 2007// TI - TASSEL: software for association mapping of complex traits in diverse samples JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm308 DO - 10.1093/bioinformatics/btm308 ID - Bradbury2007 ER - TY - JOUR AU - Said, J. I. AU - Knapka, J. A. AU - Song, M. Z. AU - Zhang, J. F. PY - 2015 DA - 2015// TI - Cotton QTLdb: a cotton QTL database for QTL analysis, visualization, and comparison between Gossypium hirsutum and G. hirsutum × G. barbadense populations JO - Mol Genet Genomics VL - 290 UR - https://doi.org/10.1007/s00438-015-1021-y DO - 10.1007/s00438-015-1021-y ID - Said2015 ER - TY - JOUR AU - Buerkle, C. A. PY - 2005 DA - 2005// TI - Maximum-likelihood estimation of a hybrid index based on molecular markers JO - Mol Ecol Notes VL - 5 UR - https://doi.org/10.1111/j.1471-8286.2005.01011.x DO - 10.1111/j.1471-8286.2005.01011.x ID - Buerkle2005 ER - TY - JOUR AU - Gompert, Z. AU - Buerkle, C. A. PY - 2010 DA - 2010// TI - INTROGRESS: a software package for mapping components of isolation in hybrids JO - Mol Ecol Resour VL - 10 UR - https://doi.org/10.1111/j.1755-0998.2009.02733.x DO - 10.1111/j.1755-0998.2009.02733.x ID - Gompert2010 ER - TY - JOUR AU - Gompert, Z. AU - Buerkle, C. A. PY - 2009 DA - 2009// TI - A powerful regression-based method for admixture mapping of isolation across the genome of hybrids JO - Mol Ecol VL - 18 UR - https://doi.org/10.1111/j.1365-294X.2009.04098.x DO - 10.1111/j.1365-294X.2009.04098.x ID - Gompert2009 ER - TY - JOUR AU - Hohenlohe, P. A. AU - Bassham, S. AU - Currey, M. AU - Cresko, W. A. PY - 2012 DA - 2012// TI - Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes JO - Philos Trans R Soc Lond B Biol Sci VL - 367 UR - https://doi.org/10.1098/rstb.2011.0245 DO - 10.1098/rstb.2011.0245 ID - Hohenlohe2012 ER - TY - JOUR AU - Payseur, B. A. AU - Hoekstra, H. E. PY - 2005 DA - 2005// TI - Signatures of reproductive isolation in patterns of single nucleotide diversity across inbred strains of mice JO - Genetics VL - 171 UR - https://doi.org/10.1534/genetics.105.046193 DO - 10.1534/genetics.105.046193 ID - Payseur2005 ER - TY - JOUR AU - Schumer, M. AU - Cui, R. AU - Powell, D. L. AU - Dresner, R. AU - Rosenthal, G. G. AU - Andolfatto, P. PY - 2014 DA - 2014// TI - High-resolution mapping reveals hundreds of genetic incompatibilities in hybridizing fish species JO - Elife VL - 3 UR - https://doi.org/10.7554/eLife.02535 DO - 10.7554/eLife.02535 ID - Schumer2014 ER - TY - JOUR AU - Jiang, C. X. AU - Chee, P. W. AU - Draye, X. AU - Morrell, P. L. AU - Smith, C. W. AU - Paterson, A. H. PY - 2000 DA - 2000// TI - Multilocus interactions restrict gene introgression in interspecific populations of polyploid Gossypium (cotton) JO - Evolution VL - 54 UR - https://doi.org/10.1111/j.0014-3820.2000.tb00081.x DO - 10.1111/j.0014-3820.2000.tb00081.x ID - Jiang2000 ER - TY - JOUR AU - Reinisch, A. J. AU - Dong, J. M. AU - Brubaker, C. L. AU - Stelly, D. M. AU - Wendel, J. F. AU - Paterson, A. H. PY - 1994 DA - 1994// TI - A detailed RFLP map of cotton, Gossypium hirsutum × Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome JO - Genetics VL - 138 ID - Reinisch1994 ER - TY - JOUR AU - Stephens, S. PY - 1950 DA - 1950// TI - The internal mechanism of speciation in Gossypium JO - Bot Rev VL - 16 UR - https://doi.org/10.1007/BF02881120 DO - 10.1007/BF02881120 ID - Stephens1950 ER - TY - JOUR AU - Lopez-Pujol, J. AU - Zhang, F. M. AU - Ge, S. PY - 2008 DA - 2008// TI - No correlation between heterozygosity and vegetative fitness in the narrow endemic and critically endangered Clematis acerifolia (Ranunculaceae) JO - Biochem Genet VL - 46 UR - https://doi.org/10.1007/s10528-008-9161-y DO - 10.1007/s10528-008-9161-y ID - Lopez-Pujol2008 ER -