Skip to main content

Table 1 Basic characteristic of TPS genes in cotton genome

From: Genome-wide Identification and analysis of the stress-resistance function of the TPS (Trehalose-6-Phosphate Synthase) gene family in cotton

Gene Accession number CDS AA pI Mw Predicted subcellular localization
name (bp) (kDa)
GaTPS1 EU750912.1 2586 861 6.27 96.96 Cytoplasmic
GaTPS2 Cotton_A_09724 2589 862 5.74 97.6 Cytoplasmic
GaTPS3 Cotton_A_38312 2517 838 5.74 95.55 Cytoplasmic
GaTPS4 Cotton_A_22808 2610 869 5.75 98.49 Nuclear
GaTPS5 Cotton_A_05024 2574 857 5.94 97.22 Cytoplasmic
GaTPS6 Cotton_A_31871 2829 942 6.91 106.42 Cytoplasmic
GaTPS7 Cotton_A_22769 2829 942 6.43 106.17 Cytoplasmic
GaTPS8 Cotton_A_02720 2562 853 5.63 96.39 Plasma Membrane
GaTPS9 Cotton_A_17512 2574 857 5.78 96.64 Cytoplasmic
GaTPS10 Cotton_A_12395 2574 857 5.70 96.88 Nuclear
GaTPS11 Cotton_A_12382 2952 983 6.33 111.4 Cytoplasmic
GaTPS12 Cotton_A_23712 2754 917 5.66 104.05 Cytoplasmic
GaTPS13 Cotton_A_23709 2652 883 6.58 99.37 Cytoplasmic
GaTPS14 Cotton_A_09181 2595 864 5.75 97.4 Cytoplasmic
GrTPS1 Cotton_D_gene_10022693 2562 853 5.84 96.33 Plasma Membrane
GrTPS2 Cotton_D_gene_10020837 2808 935 6.70 105.47 Cytoplasmic
GrTPS3 Cotton_D_gene_10038561 2517 848 5.74 95.54 Cytoplasmic
GrTPS4 Cotton_D_gene_10020702 2754 917 5.67 104.01 Cytoplasmic
GrTPS5 Cotton_D_gene_10020699 3507 1168 6.39 130.28 Plasma Membrane
GrTPS6 Cotton_D_gene_10020701 2517 838 8.04 93.69 Plasma Membrane
GrTPS7 Cotton_D_gene_10033185 2595 864 5.77 97.6 Cytoplasmic
GrTPS8 Cotton_D_gene_10037806 2589 862 5.8 97.67 Cytoplasmic
GrTPS9 Cotton_D_gene_10033657 2574 857 5.66 96.84 Cytoplasmic
GrTPS10 Cotton_D_gene_10033644 2886 961 6.27 108.94 Cytoplasmic
GrTPS11 Cotton_D_gene_10000478 2517 838 5.89 94.92 Cytoplasmic
GrTPS12 Cotton_D_gene_10031457 2574 857 5.7 96.53 Cytoplasmic
GrTPS13 Cotton_D_gene_10023754 2610 869 5.7 98.48 Nuclear
GrTPS14 Cotton_D_gene_10006852 2829 942 6.21 105.94 Cytoplasmic
GrTPS15 Cotton_D_gene_10009065 2586 861 6.24 96.88 Cytoplasmic
GhTPS1 CotAD_09030 2673 890 5.9 100.86 Plasma Membrane
GhTPS2 CotAD_24641 2610 869 5.7 98.489 Nuclear
GhTPS3 CotAD_51660 2574 857 5.85 96.64 Cytoplasmic
GhTPS4 CotAD_66147 1635 544 6.39 61.95 Cytoplasmic
GhTPS5 CotAD_22604 2826 941 5.71 106.63 Cytoplasmic
GhTPS6 CotAD_22606 2652 883 6.41 99.349 Cytoplasmic
GhTPS7 CotAD_03946 2595 864 5.82 97.57 Cytoplasmic
GhTPS8 CotAD_16380 2634 877 6.42 98.72 Cytoplasmic
GhTPS9 CotAD_16379 297 98 4.59 10.76 Extracellular
GhTPS10 CotAD_25711 2574 857 5.61 96.84 Nuclear
GhTPS11 CotAD_21592 2829 942 6.3 106 Cytoplasmic
GhTPS12 CotAD_25696 2808 935 6.83 106.28 Nuclear
GhTPS13 CotAD_66378 2517 838 5.7 95.58 Cytoplasmic
GhTPS14 CotAD_16567 2589 862 5.7 97.66 Cytoplasmic
GhTPS15 CotAD_52287 2952 983 6.27 111.48 Cytoplasmic
GhTPS16 CotAD_53302 2286 761 5.75 86.67 Cytoplasmic
GhTPS17 CotAD_74149 2559 755 6.27 85.75 Cytoplasmic
GhTPS18 CotAD_51342 2574 857 5.7 96.91 Nuclear
GhTPS19 CotAD_05656 2574 857 5.86 96.97 Cytoplasmic
GhTPS20 CotAD_00585 2574 857 5.78 96.57 Cytoplasmic
GhTPS21 CotAD_17819 2562 853 5.67 96.34 Plasma Membrane
GhTPS22 CotAD_24751 2808 935 6.7 105.44 Cytoplasmic
GhTPS23 CotAD_36474 2589 862 5.85 97.73 Cytoplasmic
GhTPS24 CotAD_40190 2808 935 6.8 105.57 Cytoplasmic