Table 1 Basic characteristic of TPS genes in cotton genome
Gene | Accession number | CDS | AA | pI | Mw | Predicted subcellular localization |
|---|---|---|---|---|---|---|
name | (bp) | (kDa) | ||||
GaTPS1 | EU750912.1 | 2586 | 861 | 6.27 | 96.96 | Cytoplasmic |
GaTPS2 | Cotton_A_09724 | 2589 | 862 | 5.74 | 97.6 | Cytoplasmic |
GaTPS3 | Cotton_A_38312 | 2517 | 838 | 5.74 | 95.55 | Cytoplasmic |
GaTPS4 | Cotton_A_22808 | 2610 | 869 | 5.75 | 98.49 | Nuclear |
GaTPS5 | Cotton_A_05024 | 2574 | 857 | 5.94 | 97.22 | Cytoplasmic |
GaTPS6 | Cotton_A_31871 | 2829 | 942 | 6.91 | 106.42 | Cytoplasmic |
GaTPS7 | Cotton_A_22769 | 2829 | 942 | 6.43 | 106.17 | Cytoplasmic |
GaTPS8 | Cotton_A_02720 | 2562 | 853 | 5.63 | 96.39 | Plasma Membrane |
GaTPS9 | Cotton_A_17512 | 2574 | 857 | 5.78 | 96.64 | Cytoplasmic |
GaTPS10 | Cotton_A_12395 | 2574 | 857 | 5.70 | 96.88 | Nuclear |
GaTPS11 | Cotton_A_12382 | 2952 | 983 | 6.33 | 111.4 | Cytoplasmic |
GaTPS12 | Cotton_A_23712 | 2754 | 917 | 5.66 | 104.05 | Cytoplasmic |
GaTPS13 | Cotton_A_23709 | 2652 | 883 | 6.58 | 99.37 | Cytoplasmic |
GaTPS14 | Cotton_A_09181 | 2595 | 864 | 5.75 | 97.4 | Cytoplasmic |
GrTPS1 | Cotton_D_gene_10022693 | 2562 | 853 | 5.84 | 96.33 | Plasma Membrane |
GrTPS2 | Cotton_D_gene_10020837 | 2808 | 935 | 6.70 | 105.47 | Cytoplasmic |
GrTPS3 | Cotton_D_gene_10038561 | 2517 | 848 | 5.74 | 95.54 | Cytoplasmic |
GrTPS4 | Cotton_D_gene_10020702 | 2754 | 917 | 5.67 | 104.01 | Cytoplasmic |
GrTPS5 | Cotton_D_gene_10020699 | 3507 | 1168 | 6.39 | 130.28 | Plasma Membrane |
GrTPS6 | Cotton_D_gene_10020701 | 2517 | 838 | 8.04 | 93.69 | Plasma Membrane |
GrTPS7 | Cotton_D_gene_10033185 | 2595 | 864 | 5.77 | 97.6 | Cytoplasmic |
GrTPS8 | Cotton_D_gene_10037806 | 2589 | 862 | 5.8 | 97.67 | Cytoplasmic |
GrTPS9 | Cotton_D_gene_10033657 | 2574 | 857 | 5.66 | 96.84 | Cytoplasmic |
GrTPS10 | Cotton_D_gene_10033644 | 2886 | 961 | 6.27 | 108.94 | Cytoplasmic |
GrTPS11 | Cotton_D_gene_10000478 | 2517 | 838 | 5.89 | 94.92 | Cytoplasmic |
GrTPS12 | Cotton_D_gene_10031457 | 2574 | 857 | 5.7 | 96.53 | Cytoplasmic |
GrTPS13 | Cotton_D_gene_10023754 | 2610 | 869 | 5.7 | 98.48 | Nuclear |
GrTPS14 | Cotton_D_gene_10006852 | 2829 | 942 | 6.21 | 105.94 | Cytoplasmic |
GrTPS15 | Cotton_D_gene_10009065 | 2586 | 861 | 6.24 | 96.88 | Cytoplasmic |
GhTPS1 | CotAD_09030 | 2673 | 890 | 5.9 | 100.86 | Plasma Membrane |
GhTPS2 | CotAD_24641 | 2610 | 869 | 5.7 | 98.489 | Nuclear |
GhTPS3 | CotAD_51660 | 2574 | 857 | 5.85 | 96.64 | Cytoplasmic |
GhTPS4 | CotAD_66147 | 1635 | 544 | 6.39 | 61.95 | Cytoplasmic |
GhTPS5 | CotAD_22604 | 2826 | 941 | 5.71 | 106.63 | Cytoplasmic |
GhTPS6 | CotAD_22606 | 2652 | 883 | 6.41 | 99.349 | Cytoplasmic |
GhTPS7 | CotAD_03946 | 2595 | 864 | 5.82 | 97.57 | Cytoplasmic |
GhTPS8 | CotAD_16380 | 2634 | 877 | 6.42 | 98.72 | Cytoplasmic |
GhTPS9 | CotAD_16379 | 297 | 98 | 4.59 | 10.76 | Extracellular |
GhTPS10 | CotAD_25711 | 2574 | 857 | 5.61 | 96.84 | Nuclear |
GhTPS11 | CotAD_21592 | 2829 | 942 | 6.3 | 106 | Cytoplasmic |
GhTPS12 | CotAD_25696 | 2808 | 935 | 6.83 | 106.28 | Nuclear |
GhTPS13 | CotAD_66378 | 2517 | 838 | 5.7 | 95.58 | Cytoplasmic |
GhTPS14 | CotAD_16567 | 2589 | 862 | 5.7 | 97.66 | Cytoplasmic |
GhTPS15 | CotAD_52287 | 2952 | 983 | 6.27 | 111.48 | Cytoplasmic |
GhTPS16 | CotAD_53302 | 2286 | 761 | 5.75 | 86.67 | Cytoplasmic |
GhTPS17 | CotAD_74149 | 2559 | 755 | 6.27 | 85.75 | Cytoplasmic |
GhTPS18 | CotAD_51342 | 2574 | 857 | 5.7 | 96.91 | Nuclear |
GhTPS19 | CotAD_05656 | 2574 | 857 | 5.86 | 96.97 | Cytoplasmic |
GhTPS20 | CotAD_00585 | 2574 | 857 | 5.78 | 96.57 | Cytoplasmic |
GhTPS21 | CotAD_17819 | 2562 | 853 | 5.67 | 96.34 | Plasma Membrane |
GhTPS22 | CotAD_24751 | 2808 | 935 | 6.7 | 105.44 | Cytoplasmic |
GhTPS23 | CotAD_36474 | 2589 | 862 | 5.85 | 97.73 | Cytoplasmic |
GhTPS24 | CotAD_40190 | 2808 | 935 | 6.8 | 105.57 | Cytoplasmic |