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Table 3 The overall TDR, FDR and MCC of three schemes of scenario 3 with 1000 cases and 1000 controls in each scheme

From: A novel Markov Blanket-based repeated-fishing strategy for capturing phenotype-related biomarkers in big omics data

Methods

Scheme 2

Scheme 3

Scheme 4

 

TDR

FDR

MCC

TDR

FDR

MCC

TDR

FDR

MCC

Bonferroni

0.62

0.04

0.77

0.11

0.20

0.30

0.12

0.17

0.31

B-H

0.78

0.32

0.73

0.21

0.37

0.36

0.22

0.17

0.43

LASSO

0.56

0.01

0.74

0.64

0.57

0.52

0.65

0.55

0.54

DASSO-MB

0.43

0.01

0.65

0.18

0.43

0.32

0.23

0.30

0.40

MBRFS

0.74

0.11

0.81

0.66

0.20

0.72

0.51

0.21

0.63

  1. Bonferroni and B-H is the multiply correction methods after χ 2 tests
  2. TDR true discovery rate
  3. FDR false discovery rate
  4. MCC matthews correlation coefficience
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BMC Genomic Data

ISSN: 2730-6844

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