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Table 3 Genotypes of the birds used for qRT-PCR analysis for validation of Digital Gene Expression results

From: Study on LOC426217 as a candidate gene for beak deformity in chicken

Trait

No.

SNP Loci

G-62 T

T24C

G36C

A192T

C204T

T222C

G285T

T363C

Deformed

1

TT

TC

GC

AT

CT

TT

GT

CC

2

TT

TC

GC

AT

CT

TT

GT

TT

3

TT

CC

CC

AA

CT

TC

GG

TT

4

GT

TC

GC

AA

CC

TC

GG

TT

5

GT

TC

GC

AA

CC

TC

GG

TT

6

TT

TT

GG

AA

TT

TT

GG

TT

7

TT

TT

GG

AT

CC

TT

GT

CC

8

TT

TT

GG

AT

CC

TT

GT

TT

9

GT

TC

GC

AT

CC

TC

GT

TT

Normal

10

TT

TC

GC

AT

CC

TC

GT

TT

11

TT

CC

CC

AA

TT

TT

GG

TT

12

TT

TC

GC

AA

CT

TC

GG

TT

13

TT

TC

GC

AA

TT

TT

GG

TT

14

TT

TC

GC

AT

CT

TT

GT

CC

15

TT

TC

GC

AT

CT

TT

GT

CC

16

TT

TC

GC

AA

CT

TC

GG

TT

17

TT

CC

CC

AA

CT

TC

GG

TT

18

TT

TC

GC

AT

CC

TC

GT

TT