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Table 4 Percentage of adjacent SNP with average r 2 > 0.2 and > 0.3 according to marker panel density

From: Linkage disequilibrium, persistence of phase and effective population size estimates in Hereford and Braford cattle

% SNP kepta Hereford Braford
% r 2 > 0.2 % r 2 > 0.3 % r 2 > 0.2 % r 2 > 0.3
50 % 24.49 16.41 18.33 11.09
25 % 17.35 10.59 12.52 6.69
20 % 15.02 8.33 10.12 4.96
17 % 14.80 8.03 9.98 4.58
14 % 13.18 6.59 8.95 4.03
7 % 8.37 3.83 6.76 2.70
  1. aIn relation to the total number of SNP obtained for each population after the quality control (41,207 SNP in Hereford and 41,241 SNP in Braford)
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