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Table 1 Comparison of 861 CNVRs detected in this study with results from three other CNV studies used the Illumina BovineHD BeadChip Array and structural variants deposited in the DGVa

From: Genome-wide identification of copy number variation using high-density single-nucleotide polymorphism array in Japanese Black cattle

  

Overlapped CNVR of this study

data

studies

Count

Percentage of count

SNP-based Studies

Hou et al. [5]

566

65.7 %

BovineHD BaseChipa

Jiang et al. [8]

115

13.4 %

 

Zhang et al. [9]

90

10.5 %

DGVab

 

280

32.5 %

All combined non-redundant datasetsc

620

72 %

  1. aBovineHD BeadChip Array contains 735,293 SNPs on autosomes
  2. bDGVa, the Database of Genomic Variation Archive [42]
  3. cDatasets derived from Hou et al. [5], Jiang et al. [8], Zhang et al. [9], and DGVa