Ridge, Lasso and Bayesian additive-dominance genomic models

BMC Genomic Data

Table 6 Partition of accuracy due to the three quantitative genetics information for a trait controlled by mixed (major and small gene effects) inheritance model with heritability 0.50 (method BayesAB (−2,8))

Information	Additive h²	Composition of information	Additive accuracy	Composition of accuracy
1: Raw	0.26	COSEG+ IBD-LD + F-IBD-R	0.69	Calculated from data
2: AWF	0.22	COSEG + LD	0.53	Calculated from data
3: DMS	0.16	LD	0.52	Calculated from data
4: (2) minus (3)	0.06	COSEG	0.10	Sqr(0.53²–0.52²)
5: (1) minus (2)	0.04	F-IBD-R	-	-
6: Pedigree-Raw	0.20	COSEG + I-IBD-R	0.45	Calculated from data
7: (6) minus (4)	0.14	I-IBD-R	0.43	Sqr(0.45²–0.10²)
9: Parametric	0.33	ALL	-	-

I-IBD-R individual IBD relationships, F-IBD-R family IBD relationships, Sqr square root

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