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Fig. 5 | BMC Genetics

Fig. 5

From: Using selection index theory to estimate consistency of multi-locus linkage disequilibrium across populations

Fig. 5

Average accuracies of genomic prediction (Acc_GEBV) versus average accuracies of predicting QTL genotypes (Acc_MLLD) with 3 QTL. Average accuracies of genomic prediction (Acc_GEBV) versus average accuracies of selection index theory to predict the QTL genotypes (Acc_MLLD) with (a) equal weight for each of the QTL, or (b) QTL weighted based on their allele substitution effects in the overall breeding goal and with 3 QTL underlying the trait randomly sampled using a heritability of 0.95 (black) or 0.3 (dark grey), or QTL selected with a low MAF and a heritability of 0.95 (light grey) for four different scenarios; HF = Holstein Friesian; MRY = Meuse-Rhine-Yssel; GWH = Groninger White Headed

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