Skip to main content
Fig. 7 | BMC Genetics

Fig. 7

From: Impact of genetic similarity on imputation accuracy

Fig. 7

Scatter plot of G ST and average Rsq-score/Info-scores of low-frequency variants (left panels) versus common variants (right panels). We present the results of the three imputation frameworks MaCH, MaCH-minimac and IMPUTE2. For low-frequency variants, both, overall yield of well-imputed SNPs and correlation between G ST and imputation accuracy are reduced. Pearson’s correlation coefficients and the p-values obtained from computing a test of the correlation being zero are also described

Back to article page
\