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Table 1 Allele frequencies of SNPs located in BosNet-prioritized genes

From: Associations of SNPs located at candidate genes to bovine growth traits, prioritized with an interaction networks construction approach

Breed Gene SNP_ID A C G T
Charolais EGFR rs11004527   0.5217   0.4783
rs13687792   0.4275   0.5725
rs21017031   0.1413   0.8587
rs21165825   0.9312   0.0688
rs37921750 0.2283   0.7717  
rs38513127 0.2681   0.7319  
IGF1R rs13486888   0.5657   0.4343
rs20814099   0.6957   0.3043
rs21077860   0.5438   0.4562
rs38090000 0.0725   0.9275  
rs4164070 0.1739   0.8261  
rs4196133   0.8514   0.1486
INS rs10949071   0.7799   0.2201
RXRA g.105,985,027    0.5833 0.4167
g.105,985,044    0.3496 0.6504
g.106,004,449   0.3664   0.6336
g.105,986,715    0.9565 0.0435
TCF15 g.60,997,442 0.3043    0.6957
Brahman EGFR rs11004527   0.1187   0.8812
rs13687792   0.1415   0.8585
rs21017031   0.8738   0.1262
rs37921750 0.0613   0.9387  
rs38513127 0.0619   0.9381  
IGF1R rs13486888   0.9159   0.0841
rs20814099   0.8679   0.1321
rs20973667   0.1682   0.8318
rs378266791   0.5685   0.4315
INS g.50,037,033 0.0896   0.9104  
g.50,036,892 0.2404   0.7596  
g.50,036,987   0.3396   0.6604
RXRA g.106,004,142 0.5054   0.4946  
g.106,004,147   0.5841   0.4159
g.105,986,149 0.425   0.575  
g.105,989,179 0.4074   0.568  
g.106,004,180 0.7938   0.2062  
g.106,004,184 0.3586   0.6414  
g.105,989,219   0.8048   0.1952
g.105,989,022   0.4112   0.5888
g.105,990,023 0.1898 0.8102   
g.105,989,236   0.8102   0.1898
g.106,011,253   0.4348   0.5652
g.105,985,027    0.0521 0.9479
g.105,985,044    0.7128 0.2872
g.106,004,449   0.6311   0.3689
g.106,004,518 0.5728 0.4272   
g.106,011,539 0.6038   0.3962  
g. 105,990,568 0.82   0.18  
g.105,989,080   0.4151   0.5849
rs13628911   0.875   0.125
TCF15 g.60,997,442 0.0888   0.9112  
USF1 g.8,458,558 0.2286   0.7714  
g.8,458,837 0.774   0.226  
g.8,459,971 0.2667   0.7333  
g.8,460,354   0.226   0.774
  1. BW Birth weight, WW Weaning weight, YW Yearling weight, FS Frame size. MC mean comparison, means with different letter are significantly different (P < 0.05). *P < 0.05; **P < 0.01