Genetic diversity and genetic structure of the Siberian roe deer (Capreolus pygargus) populations from Asia

BMC Genomic Data

Table 1 Genetic characteristics of Siberian roe deer in each region/location across 12 microsatellite loci

	Region	N	MNA	Ar	H _E	H _O	F _IS ^a	HWE P ^b	Number of loci with null allele	NPA (Freq. rang)
East	SKJ	33	3.75	2.18	0.386	0.329	0.150*	0.000 (3)	3 (RT20, CSSM41, IDVGA29)	4 (0.016-0.106)
	SKM	31	6.58	3.48	0.596	0.451	0.247*	0.000 (7)	5 (RT1, RT30, Roe09, MB25, IDVGA8)	3 (0.016-0.065)
	RPR	30	7.42	3.67	0.623	0.490	0.217*	0.000 (7)	5 (RT1, RT20, MB25, CSSM41, IDVGA8)	4 (0.017-0.050)
	RSMG	21	7.00	5.67	0.598	0.500	0.169*	0.000 (4)	4 (RT1, MB25, BM757, IDVGA8)	7 (0.024-0.025)
	RSO	9	5.00	3.36	0.550	0.438	0.215*	0.000 (2)	2 (RT1, IDVGA8)	4 (0.056)
	MGN	12	5.67	3.66	0.628	0.544	0.138 ^NS	0.000 (4)	2 (MB25, IDVGA8)	3 (0.042)
	RYA	18	5.33	3.26	0.553	0.459	0.175*	0.000 (4)	4 (RT20, Roe09, BM757, IDVGA8)	5 (0.031-0.094)
	RARN	12	3.92	3.87	0.560	0.503	0.107 ^NS	0.000 (2)	1 (IDVGA8)	0
	RAL	5	2.92	2.81	0.541	0.471	0.144 ^NS	0.003 (4)	- ^c	-
	RNO	7	3.33	2.91	0.539	0.524	0.031 ^NS	0.988 (0)	- ^c	-
	RURK	44	4.92	3.73	0.534	0.495	0.075 ^NS	0.000 (7)	3 (Roe09, CSSM41, IDVGA8)	3 (0.011-0.012)
	RKU	21	3.83	2.68	0.530	0.512	0.034 ^NS	0.000 (6)	2 (Roe09, IDVGA8)	1 (0.025)
	RUL	23	4.42	2.82	0.522	0.478	0.085 ^NS	0.000 (5)	2 (Roe09, CSSM41)	2 (0.022-0.024)
West	Mean	27	5.56	3.68	0.550	0.461	0.163	0.000 (5)	-	-

Number of individual per population (N), Allelic diversity (MNA, mean no. of alleles per locus), allelic richness (Ar), expected heterozygosity (H _E) at Hardy-Weinberg equilibrium, observed heterozygosity (H _O), inbreeding coefficient (F _IS), and the probability (P) of being in Hardy-Weinberg equilibrium, null alleles, number of private alleles (NPA)
^a For F _IS within samples based on 2400 randomizations using the FSTAT program. NS: Not significant after adjusted nominal level (5 %) = 0.004
^b Probability values using the Fisher’s method implemented in the GENEPOP program. Number in parentheses indicates the no. of loci showing a significant departure (P <0.05) from Hardy-Weinberg equilibrium
^c Not determined due to small sample size

ISSN: 2730-6844