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Table 1 Computing times with 10 processors for different populations and SNV densities using one simulated bovine chromosome

From: Fast imputation using medium or low-coverage sequence data

Software Reference data Array genotypes Computing time (minutes)
Population size SNVs Population size SNVs
Beagle 250 1,000,000 250 20,000 4258
findhap 250 1,000,000 250 20,000 11
500 1,000,000 250 20,000 19
1000 1,000,000 250 20,000 37
10,000 1,000,000 250 20,000 420
10,000 20,000 250 2000 17
10,000 2000 250 200 4
884 394,274 218 39,440 17