Fig. 1
From: Fast imputation using medium or low-coverage sequence data
Correctly called or imputed genotypes by read depth, error rate, and HD inclusion. The percentage of correctly called genotypes is shown for 250 sequenced animals as well as the percentage of correctly imputed SNPs for 250 animals with HD genotypes. Genotype calling and imputation were done simultaneously. The x-axis shows sequence read depth, error rate and inclusion (1) or exclusion (0) of HD data for sequenced animals (e.g. 2-4-1 indicates a sequence read depth of 2×, error rate of 4 %, and the inclusion of HD data in the simulated sequence data)