Table 1 Overview of the genome-wide significant QTL for fertility index in Danish Jersey cattle analyzed with a sire model
Chromosome | Start position (bp) | End position (bp) | Position of the most significantly associated SNP (bp) | MAF | -log 10 (P-value) | Allele substitution effect | Standard errors |
|---|---|---|---|---|---|---|---|
20 | 23,958,004 | 24,957,002 | 24,457,090 | 0.20 | 10.48 | −4.22 | 0.63 |
23 | 30,137,773 | 31,137,022 | 30,637,085 | 0.39 | 9.72 | −3.49 | 0.54 |
7 | 79,273,583 | 80,130,796 | 79,631,927 | 0.07 | 8.96 | −6.22 | 1.01 |
9 | 38,571,753 | 39,570,749 | 39,070,817 | 0.34 | 8.82 | −3.36 | 0.55 |
25 | 26,311,042 | 27,310,599 | 26,810,616 | 0.27 | 8.72 | −3.62 | 0.59 |
9 | 103,247,641 | 104,245,698 | 103,745,893 | 0.23 | 8.49 | −3.65 | 0.61 |