Table 1 Currently available admixture inference software
From: ALDsuite: Dense marker MALD using principal components of ancestral linkage disequilibrium
Software | Dense | MALD | >2 | Cited | References |
|---|---|---|---|---|---|
markers | pops | ||||
STRUCTURE | ✓ | 12427 | |||
ADMIXMAP | ✓ | 201 | [22] | ||
ANCESTRYMAP | ✓ | 361 | [11] | ||
FRAPPE | ✓ | ✓ | 255 | [23] | |
SABER+ | ✓ | ✓ | 157 | ||
LAMP-LD | ✓ | ✓ | 131 | [17] | |
HAPAA | ✓ | ✓ | 48 | [15] | |
SWITCH-MHMM | ✓ | ✓ | 35 | [25] | |
WINPOP | ✓ | ✓ | 54 | [26] | |
HAPMIX | ✓ | 210 | [16] | ||
ADMIXTURE | ✓ | ✓ | 293 | [27] | |
PCAdmix | ✓ | ✓ | 14 | [28] | |
MULTIMIX | ✓ | ✓ | 9 | [18] | |
SEQMIX | ✓ | [29] | |||
ALDER | ✓ | ✓ | 20 | [30] | |
RFMix | ✓ | ✓ | 7 | [19] | |
ALLOY | ✓ | ✓ | 1 | [31] | |
EILA | ✓ | ✓ | 2 | [32] | |
DBM-Admix | ✓ | ✓ | [33] | ||
MaCH-Admix | ✓ | ✓ | 14 | [34] | |
ELAI | ✓ | ✓ | 2 | [35] |