From: Genetic polymorphisms of VIP variants in the Tajik ethnic group of northwest China
SNP ID | Genes | Chromosome | Position | Allele | Allele frequencies | ||
---|---|---|---|---|---|---|---|
A | B | A(%) | B(%) | ||||
rs1801131 | MTHFR | 1 | 11854476 | C | A | 35.0 | 65.0 |
rs1801133 | MTHFR | 1 | 11856378 | T | C | 19.2 | 80.8 |
rs890293 | CYP2J2 | 1 | 60392494 | G | T | 48.5 | 51.5 |
rs3918290 | DPYD | 1 | 97915614 | G | / | 100 | 0 |
rs6025 | F5 | 1 | 169519049 | C | A | 100 | 0 |
rs20417 | PTGS2 | 1 | 186650320 | G | C | 97.0 | 3.0 |
rs689466 | PTGS2 | 1 | 186650750 | A | G | 85.4 | 14.7 |
rs4124874 | UGT1A10 | 2 | 234665659 | C | A | 42.8 | 57.2 |
rs10929302 | UGT1A10 | 2 | 234665782 | G | A | 73.5 | 26.5 |
rs4148323 | UGT1A10 | 2 | 234669144 | A | G | 3.5 | 96.5 |
rs7626962 | SCN5A | 3 | 38620907 | G | / | 100 | 0 |
rs1805124 | SCN5A | 3 | 38645420 | G | A | 29.0 | 71.0 |
rs6791924 | SCN5A | 3 | 38674699 | G | / | 100 | 0 |
rs3814055 | NR1I2 | 3 | 119500034 | C | T | 58.0 | 42.0 |
rs2046934 | P2RY12 | 3 | 151057642 | T | C | 90.0 | 10.0 |
rs1065776 | P2RY1 | 3 | 152553628 | T | C | 6.1 | 93.9 |
rs701265 | P2RY1 | 3 | 152554357 | G | A | 20.0 | 80.0 |
rs975833 | ADH1A | 4 | 100201739 | G | C | 74.2 | 25.8 |
rs2066702 | ADH1B | 4 | 100229017 | C | T | 97.5 | 2.5 |
rs1229984 | ADH1B | 4 | 100239319 | G | A | 70.5 | 29.5 |
rs698 | ADH1C | 4 | 100260789 | A | G | 67.0 | 33.0 |
rs17244841 | HMGCR | 5 | 74607099 | A | / | 100 | 0 |
rs3846662 | HMGCR | 5 | 74615328 | T | C | 48.5 | 51.5 |
rs17238540 | HMGCR | 5 | 74619742 | T | / | 100 | 0 |
rs1042713 | ADRB2 | 5 | 148206440 | G | A | 60.5 | 39.5 |
rs1042714 | ADRB2 | 5 | 148206473 | G | C | 34.0 | 66.0 |
rs1800888 | ADRB2 | 5 | 148206885 | C | T | 98.0 | 2.0 |
rs1142345 | TPMT | 6 | 18130918 | G | A | 0 | 100 |
rs1800460 | TPMT | 6 | 18139228 | A | G | 0 | 100 |
rs2066853 | AHR | 7 | 17379110 | G | A | 82.5 | 17.5 |
rs1045642 | ABCB1 | 7 | 87138645 | T | C | 57.1 | 42.9 |
rs2032582 | ABCB1 | 7 | 87160617 | G | T | 42.7 | 57.3 |
rs2032582 | ABCB1 | 7 | 87160617 | G | A | 86.4 | 13.6 |
rs2032582 | ABCB1 | 7 | 87160617 | T | A | 92.7 | 7.4 |
rs1128503 | ABCB1 | 7 | 87179601 | T | C | 58.1 | 41.9 |
rs10264272 | CYP3A5 | 7 | 99262835 | C | / | 100 | 0 |
rs776746 | CYP3A5 | 7 | 99270539 | G | A | 89.5 | 10.5 |
rs4986913 | CYP3A4 | 7 | 99358459 | C | T | 99.0 | 1.0 |
rs4986910 | CYP3A4 | 7 | 99358524 | T | / | 100 | 0 |
rs4986909 | CYP3A4 | 7 | 99359670 | C | / | 100 | 0 |
rs12721634 | CYP3A4 | 7 | 99381661 | T | / | 100 | 0 |
rs2740574 | CYP3A4 | 7 | 99382096 | A | G | 98.5 | 1.5 |
rs3815459 | KCNH2 | 7 | 150644394 | A | G | 40.5 | 59.5 |
rs36210421 | KCNH2 | 7 | 150644428 | G | T | 99.0 | 1.0 |
rs12720441 | KCNH2 | 7 | 150647304 | C | / | 100 | 0 |
rs3807375 | KCNH2 | 7 | 150667210 | A | G | 43.0 | 57.0 |
rs4986893 | CYP2C19 | 10 | 96540410 | G | / | 100 | 0 |
rs4244285 | CYP2C19 | 10 | 96541616 | G | A | 92.5 | 7.5 |
rs1799853 | CYP2C9 | 10 | 96702047 | C | T | 100 | 0 |
rs1801252 | ADRB1 | 10 | 115804036 | G | A | 20.2 | 79.8 |
rs1801253 | ADRB1 | 10 | 115805055 | C | G | 79.8 | 20.2 |
rs5219 | KCNJ11 | 11 | 17409572 | C | T | 56.1 | 43.9 |
rs1695 | GSTP1 | 11 | 67352689 | A | G | 77.0 | 23.0 |
rs1138272 | GSTP1 | 11 | 67353579 | T | C | 9.0 | 91.0 |
rs1800497 | DRD2 | 11 | 113270828 | T | C | 17.9 | 82.1 |
rs6277 | DRD2 | 11 | 113283459 | G | A | 61.5 | 38.5 |
rs4149056 | SLCO1B1 | 12 | 21331549 | T | C | 90.5 | 9.5 |
rs7975232 | VDR | 12 | 48238837 | C | A | 49.0 | 51.0 |
rs1544410 | VDR | 12 | 48239835 | G | A | 66.0 | 34.0 |
rs2239185 | VDR | 12 | 48244559 | T | C | 51.0 | 49.0 |
rs1540339 | VDR | 12 | 48257326 | G | A | 67.2 | 32.8 |
rs2239179 | VDR | 12 | 48257766 | A | G | 56.5 | 43.5 |
rs3782905 | VDR | 12 | 48266167 | C | G | 70.0 | 30.0 |
rs2228570 | VDR | 12 | 48272895 | T | C | 34.5 | 65.5 |
rs10735810 | VDR | 12 | 48272895 | C | T | 66.5 | 33.5 |
rs11568820 | VDR | 12 | 48302545 | G | A | 77.3 | 22.7 |
rs1801030 | SULT1A2 | 16 | 28617485 | A | / | 100 | 0 |
rs3760091 | SULT1A1 | 16 | 28620800 | C | G | 54.1 | 45.9 |
rs7294 | VKORC1 | 16 | 31102321 | C | T | 67.0 | 33.0 |
rs9934438 | VKORC1 | 16 | 31104878 | G | A | 50.5 | 49.5 |
rs28399454 | CYP2A6 | 19 | 41351267 | G | / | 100 | 0 |
rs28399444 | CYP2A6 | 19 | 41354190 | A | / | 100 | 0 |
rs1801272 | CYP2A6 | 19 | 41354533 | T | / | 100 | 0 |
rs28399433 | CYP2A6 | 19 | 41356379 | G | T | 10.5 | 89.5 |
rs3745274 | CYP2B6 | 19 | 41512841 | G | T | 64.0 | 36.0 |
rs28399499 | CYP2B6 | 19 | 41518221 | T | / | 100 | 0 |
rs3211371 | CYP2B6 | 19 | 41522715 | C | T | 50.0 | 50.0 |
rs12659 | SLC19A1 | 21 | 46951555 | C | T | 56.6 | 43.4 |
rs1051266 | SLC19A1 | 21 | 46957794 | G | A | 55.7 | 44.3 |
rs1131596 | SLC19A1 | 21 | 46957915 | T | C | 60.6 | 39.4 |
rs4680 | COMT | 22 | 19951271 | A | G | 53.5 | 46.5 |
rs59421388 | CYP2D6 | 22 | 42523610 | C | / | 100 | 0 |
rs28371725 | CYP2D6 | 22 | 42523805 | G | A | 90.0 | 10.0 |
rs16947 | CYP2D6 | 22 | 42523943 | G | A | 74.1 | 25.9 |
rs5030656 | CYP2D6 | 22 | 42524175 | AAG | delAAG | 99.5 | 0.5 |
rs61736512 | CYP2D6 | 22 | 42525134 | C | / | 100 | 0 |
rs28371706 | CYP2D6 | 22 | 42525772 | C | T | 99.0 | 1.0 |