From: SNP discovery in swine by reduced representation and high throughput pyrosequencing
Breed | Number of Animals1 | Number in Pool2 | Genotyped (%)3 | Monomorphic (%)4 | Average MAF | Heterozygosity |
---|---|---|---|---|---|---|
Berkshire | 7 | 3 | 98.21 | 20.83 | 0.2142 | 0.2866 |
Duroc | 40 | 4 | 98.13 | 15.48 | 0.2003 | 0.2537 |
Eur. Wild Boar | 5 | 0 | 99.28 | 44.64 | 0.1533 | 0.2520 |
Hampshire | 29 | 4 | 98.81 | 12.50 | 0.2131 | 0.2692 |
Landrace | 43 | 4 | 98.01 | 3.57 | 0.2457 | 0.3017 |
Meishan | 5 | 0 | 98.10 | 44.64 | 0.1447 | 0.1881 |
Pietrain | 6 | 2 | 98.81 | 25.00 | 0.2041 | 0.2892 |
Yorkshire | 41 | 4 | 98.88 | 5.36 | 0.2429 | 0.2887 |